Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod03g2771 | ATGGGAAGCTTCACCCCTGTAGATTTTGTGAGAAAGATTTACTCAGTGGTTGATCGTGAGCATGTGTTTGCCTACATTGATGACCCGTGTAATGCTGCATACCCTCTGATGCAAAAACTAAGGCATGTGCTTGTGGAACATGCATTGTTGAGTAATGATGGGTTGAAAAGTGTAGATGCTTCTATTTTCCTGAAGATCAGTGCCTTTGAGGAAGCACTGAAGATAGTCTTGCCCAAAGAAGTTGAGTCTACAAGGAATGCCTTTGAGAGAGGGTGTCCACAAAGTCCCAACAGAATTAAGGAGTGCAGATCCTATCCACTTTATAAATTTGTCAGGGAGGAATTGGGGACAGAGTTTCTAACTGGAGAGAAAATTAAGTCCCCAGGAGAAGATTTTGAAAAAGTTTTCAGTGCAATCAATCGAGGAAAGTTGATAGACCCACTGTTTGAATGCCTCAAAGATTGGGATGGGGCTCCTCTTCCTATATGTGAGAGTCCCTGA | 501 | 0.4271 | MGSFTPVDFVRKIYSVVDREHVFAYIDDPCNAAYPLMQKLRHVLVEHALLSNDGLKSVDASIFLKISAFEEALKIVLPKEVESTRNAFERGCPQSPNRIKECRSYPLYKFVREELGTEFLTGEKIKSPGEDFEKVFSAINRGKLIDPLFECLKDWDGAPLPICESP* | 167 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod03g2771 | 166 | PANTHER | HISTIDINE AMMONIA-LYASE | 6 | 163 | IPR001106 | - | |
| Dod03g2771 | 166 | Gene3D | Fumarase/aspartase (Central domain) | 94 | 163 | - | - | |
| Dod03g2771 | 166 | PANTHER | AMMONIA-LYASE, PUTATIVE-RELATED | 6 | 163 | - | - | |
| Dod03g2771 | 166 | SUPERFAMILY | L-aspartase-like | 10 | 163 | IPR008948 | GO:0003824 | |
| Dod03g2771 | 166 | Gene3D | - | 1 | 93 | IPR023144 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod03g2771 | Dod-Chr3 | 59461806 | 59462306 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod03g2771 | 2 | 163 | Monolignol Biosynthesis Gene Families | AT3G53260 | 63.190 | 3.22e-71 | 226 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod03g2771 | K10775 | - | csin:114273057 | 239.58 |