Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2760 ATGAGCAACATAGAGGGGTCCAAAGGGATAAGAAAAGTTGCAATATTTGTCAAAATTGTTGTTGTATTGAGCTGCATTGCTTTTGGGCCAGGGCGAGTCACTTGTCAGACCAACAATGCTGCCGTTCAGATATTCGCCCAGGAATTGTTCAATAGCATGCAAAACTACACCTCCATCTTCAAGGCCTCAATCAAAAAAGAGATGGGCTTTTGCATAGTTGATGTGGATAGCGATTGGGATGGGGCCTTCAATTTCTCTAAAGATCTCACTTTTTTAACCTCATGTGCCCAGAAGTTAAAAGGTGATAATATTACACAGCGCATGTGCACAGCAGGAGAAATAGAAGCCTATGCCAGAAGTTTTGCCACGTCATCTGGAAAAGGGGGCACATCCAAATTCTTGAATCCCAACGTGAACTGCAATTTGAGCACCTGGCTTAATGGTTGTGAGCCCGGATGGGGATGTAAGGCTAATCAGAAAGTAGACCTTAACAGTAACAAGAAGGAGGTGCCTGTTAGATCTGTTGACTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCTCGTGGCATCACCTGCATGATACCTTGCCCATTGGGCGCTTACTGCCCACAGGCGCAACTCAATAAAACTACTGGAGTATGTGAACCATATCTTTATCAGCTACCTCCCGGAAAGGCTAACCATTCTTGTGGGGGAGCAGATTTGTGGGCGGATATTGGTAGGAGTTCAGAGATATTCTGTTCACCAGGATCATTCTGTCCTTCTACTATCATAACAAGCTTTTGCAATAAAGGGTTTTACTGCAGAACAGGTTCTACTGCTCAAGAGAGATGTTTCAAGTTGGCAACCTGTGAGCCTAAATCAGAAAATCAAAATATTACTGCATATGGTGCCCTGTTTTTTGCTGGGTTGTTTTTCATGCTGATCATCATATACAACTGCTCCGACCAAGTTCTAGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCACAAAGTGTGAGAGACTCACAAGCACGTGAGAAATGGAAATCTGCAAAAGACATAGCTAAGAAGCATGCAGTAGGACTGCAATCGCAGCTATCAAGAACCTTTTCTCGACAGAAAACTTCCAAGAAAGGATCCTTACCACCTATGGCACCTGATAAAAAGGGAAAGAAAAAGGATAAAAACAACCTCTCAAAAATAATAAATGACATTGAGCAAGACCCTGATAGCCAAGAAGGTTTCAATATTCAGATAGGAGATAAAAATGTCAAGAAGCAAGCACCAAGGGGTAAGCAACTGCACACTCAGAGCCAAATTTTCAAGTATGCATATGGCCAGATTGAGAAAGAGAAGGCTTTACAGGAACAAACCAAAAACTTGACCTTCTCTGGGGTTATTTCGATGGCTAGTGACATTGAGATAAGGAAGAGGGCTACCATTGAGGTTGCTTTTAAAGATTTAACACTCACTCTGAAAGGAAAAAACATACATTTATTAAGAAGTGTGACAGGTAAATTGTTTCCTGGCCGAGTTTCGGCAGTTATGGGCCCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGGAAAGCAACTGGGTGCCACACAACTGGACAAGTTCTTGTAAATGGCCAGGAATCATCAATTAGGTCCTACAAGAAGATCATTGGATTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAGGAGAATCTGTGGTTCAGTGCCAGATGCAGGCTCTCTGCTGATCTACCAAAAGAAGAGAAGGTTTTAGTGGTTGAAAGAGTCATTGAGTCCTTGGGCTTGCAGGCAGTAAGGGACTCTCTGGTTGGAACAGTAGAGAAGCGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAATGTTGGACTGGAAATGGTCATGGAACCTTCACTTCTAATTTTAGATGAACCCACATCTGGTTTGGACAGTTCATCTTCTCAGTTACTGCTTAGAGCACTTAGACGTGAAGCCCTTGAGGGAGTAAACATATGTATGGTCCTTCACCAACCGAGCTACACATTGTTCAAGATGTTTGATGATTTTATACTGCTAGCTAAAGGAGGCGTTACAGTGTATCATGGACCGGTGAACAAAGTGGAAGAGTACTTTTCCAGCTTGGGAATTGTTGTCCCTGACCGTGTCAACCCTCCAGATTACTACATTGACATTTTAGAAGGAATAGTAAAATTACCAGCTAGCTTAGGAGTGACCTATAAGCAACTACCTGTTAGATGGATGCTTCATAATGGTTACCCCGTGCCGATGGATATGCTGCAGCTTCACAAGGAGGAGCAGCTGACCACTGCAAATAATGCTGCTGCTGGTCCTTCCTTTGCTGGAGAACTGTGGCAGGATGTAAAAGCCAATGTTGAGATAAAGAAGGACAACTTTCATTACAAATTCTTGAGTTCACATGATTTGTCCAATAGGTTGACACCTGGAGTTTTCCAACAATACAAGTACTTTCTTGGAAGAGCTGGTAAGCAGAGGCTACGAGAAGCTAGAACGCAAGCTGTAGATTTTCTAATTTTGCTGCTAGCTGGACTTTGCTTAGGAACACTAGCCAAAGTGAGTGATGAAACATTTGGAGCAACCGGTTATACATACACTGTAATAGCAGTATCACTCCTTTCCAAGATTGCGGCTTTGAGATCGTTCTCCTTGGATAAGTTGCACTATTGGAGGGAGAGTGCTTCTGGCATGAGCAGCCTGGCTTATTTTCTTTCAAAGGACACAGTTGACCATTTCAGTACAGCTATCAAACCTCTGGTGTACCTCTCCATGTTCTACTTCTTCAACAATCCAAGATCTTCTTTCCCAGATAACTACGTTGTTCTGCTGTGTTTGGTGTACTGTGTCACTGGCATAGCTTATGTGTTGGCAATCTTCCTTGAACCTGGCCCAGCCCAGCTGTGGTCAGTGTTGCTTCCTGTTGTTTTGACACTGATAGCAACCTATGACAATGAAGAAGATAGCAAATATGTGCAACTTATGTCTGACTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCTAAAAGATATTCAGGAGTTTGGATAATAAGCCGATGTGGTGCACTCCATAAGAGTGGCTATGATCTCAACAATTGGTATCAATGTTTAGCCCTTCTTGTAGCAACTGGAGTAATAAGTCGCATGCTTGCATTCTTTTGTATGATAACCTTCCAGAAGAAATAG 3243 0.4277 MSNIEGSKGIRKVAIFVKIVVVLSCIAFGPGRVTCQTNNAAVQIFAQELFNSMQNYTSIFKASIKKEMGFCIVDVDSDWDGAFNFSKDLTFLTSCAQKLKGDNITQRMCTAGEIEAYARSFATSSGKGGTSKFLNPNVNCNLSTWLNGCEPGWGCKANQKVDLNSNKKEVPVRSVDCQPCCEGFFCPRGITCMIPCPLGAYCPQAQLNKTTGVCEPYLYQLPPGKANHSCGGADLWADIGRSSEIFCSPGSFCPSTIITSFCNKGFYCRTGSTAQERCFKLATCEPKSENQNITAYGALFFAGLFFMLIIIYNCSDQVLATRERRQAKSRERAAQSVRDSQAREKWKSAKDIAKKHAVGLQSQLSRTFSRQKTSKKGSLPPMAPDKKGKKKDKNNLSKIINDIEQDPDSQEGFNIQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALQEQTKNLTFSGVISMASDIEIRKRATIEVAFKDLTLTLKGKNIHLLRSVTGKLFPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGQESSIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGVTVYHGPVNKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKLPASLGVTYKQLPVRWMLHNGYPVPMDMLQLHKEEQLTTANNAAAGPSFAGELWQDVKANVEIKKDNFHYKFLSSHDLSNRLTPGVFQQYKYFLGRAGKQRLREARTQAVDFLILLLAGLCLGTLAKVSDETFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTAIKPLVYLSMFYFFNNPRSSFPDNYVVLLCLVYCVTGIAYVLAIFLEPGPAQLWSVLLPVVLTLIATYDNEEDSKYVQLMSDLCYTKWALEAFVISNAKRYSGVWIISRCGALHKSGYDLNNWYQCLALLVATGVISRMLAFFCMITFQKK* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2760 1080 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 481 722 IPR003439 GO:0005524
Dod03g2760 1080 Pfam ABC transporter 498 650 IPR003439 GO:0005524
Dod03g2760 1080 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 1076 - -
Dod03g2760 1080 ProSitePatterns ABC transporters family signature. 622 636 IPR017871 GO:0005524
Dod03g2760 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 719 IPR027417 -
Dod03g2760 1080 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 39 1076 - -
Dod03g2760 1080 MobiDBLite consensus disorder prediction 328 394 - -
Dod03g2760 1080 Pfam ABC-2 type transporter 679 1080 IPR043926 GO:0140359
Dod03g2760 1080 Gene3D - 469 718 IPR027417 -
Dod03g2760 1080 CDD ABCG_EPDR 479 705 - -
Dod03g2760 1080 MobiDBLite consensus disorder prediction 360 376 - -
Dod03g2760 1080 SMART AAA_5 507 708 IPR003593 -
Dod03g2760 1080 MobiDBLite consensus disorder prediction 328 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2760 Dod-Chr3 59338305 59346013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2760 508 703 Calmodulin-binding Proteins AT2G36910 30.093 1.57e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2760 - - gmx:100794093 1758.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2760 03 59338305 59346013 Dod03g2760 03 59338305 59346013 ECH