Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2759 ATGAGTTCAGATAAAGTTCTTCCCCCAAGTTTTTCTTCTTCTCCTTCTTCTTCAGAAAACCAGCCAAAAACCATGAATAATTTTTCTGAGAGCACCCCTCTCCTTCTTAAGGCGAAAAAGGACCGTCACACGAAAGTGAATGGAAGAGAAAGGCGCGTTCTCTTGCCACCACTTTGTGCTGCCCGCGTGTTTCAGCTCACGCGTGAGCTGGGACACAAGACTCATGGTGAGACCATTGAGTGGCTCTTGCGCCACGCTGAACCCTCCATTGTTGCTGCAACTGGCAAAGGGCTTTCATCATCATCATCATCATCATCACCTTCTGATGCTGTTAATAATACACTATCAGCAGCATGCGTGGATCATAGAAGTGCTGGTGGTGGTGAAGGTGTGAACGGTGAAAGAGGAGGGTCGTTGTTCTTGTCACAAATGGAGCTTGACGTGTTTGCAAACATTGGTGTGAGGCATTCTGAAAGTGAGATAGAAGCGATCCAATCCATGTTGAACGAGCTGAATTGA 519 0.4682 MSSDKVLPPSFSSSPSSSENQPKTMNNFSESTPLLLKAKKDRHTKVNGRERRVLLPPLCAARVFQLTRELGHKTHGETIEWLLRHAEPSIVAATGKGLSSSSSSSSPSDAVNNTLSAACVDHRSAGGGEGVNGERGGSLFLSQMELDVFANIGVRHSESEIEAIQSMLNELN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2759 172 MobiDBLite consensus disorder prediction 1 32 - -
Dod03g2759 172 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 16 119 - -
Dod03g2759 172 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Dod03g2759 172 Pfam TCP family transcription factor 38 110 IPR017887 -
Dod03g2759 172 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 119 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2759 Dod-Chr3 59334083 59334601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2759 40 123 TCP Transcription Factor Family AT5G23280 58.333 1.33e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod03g2759 TCP 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2759 - K16221 var:108322003 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1591 10 36744753 36745675 Dod03g2759 03 59334083 59334601 PCT