Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2753 ATGGGTGAAATTGAGGGGTCTCCAGGGAGCTCCATGCATGGAGTGACAGGAAGGGAACAAACCTTCATATCCTCGGTTTCATCCCCAATGGTTCCAACTGACACCACAGCAAAATTTGCTTTACCTGTTGATTCTGAACACAAGGCCAAGGTCTTCAAATTGTTCTCCTTGGCCAACCCTCACATGAGAACCTTCCACTTGTCTTGGATATCCTTCTTCACATGCTTTGTCTCAACTTTTGCAGCAGCACCGCTTGTCCCCATCATCCGTGACAACCTCAACCTCACAAAAGTTGACATTGGCAATGCCGGGGTTGCTTCTGTCTCCGGAAGCATCTTCTCTAGGCTCACAATGGGTGCAGTTTGTGACCTGTTAGGCCCACGTTATGGCTGTGCTTTCCTTATCATGCTCTCAGCACCAACTGTGTTCTGCATGTCATTTGTCAACGATGCTGCAGGGTACATAGCTGTGAGGTTCATGATTGGGTTCTCATTGGCCACTTTTGTTTCATGCCAGTACTGGATGAGCACCATGTTCAACAGCAAGATTATAGGGCTTGTGAATGGAACTGCTGCTGGGTGGGGTAACATGGGTGGTGGGGCCACTCAGCTCATAATGCCTTTGTTGTATGAGCTGATTAGGAGAGCTGGGGCCACACCCTTCACTGCATGGAGGATTGCCTTCTTCATCCCTGGCTGGATGCATGTGATCATGGGGATCGTGGTCCTAACCCTAGGCCAAGATTTGCCAGATGGAAACCTTGGTGCCTTGCAGAAGAAGGGTGATGTAGCCAAAGACAAGTTCTCCAAGGTGTTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCCCTTCTTTATGGATACTCTATGGGAGTTGAATTAACCACTGACAATGTCATTGCAGAGTATTTCTATGACAGGTTTAATCTGAAGCTACACACTGCTGGAATCATTGCCGCTATATTTGGAATGGCTAACCTCATTGCTAGGCCCTTTGGTGGATACGCATCTGATCTTGCAGCAAGGTTGTTTGGCATGAGAGGCAGGCTTTGGGCACTATGGACCCTCCAAACATTAGGAGGTGCTTTCTGCATATGGCTTGGCCGTGCCAATTCACTCCCAATTGCTGTGTTGGCTATGATCCTCTTCTCTGTTGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATCATTCCCTTCATCTCAAGGAGGTCTCTTGGGATCATATCAGGCCTAACTGGTGCAGGTGGCAACTTTGGCTCTGGCTTGACCCAGTTGGTCTTCTTTTCAACCAATAGGTTCTCCACATCCACTGGTCTCTCCTTGATGGGTGTGATGATTGTGTGTTGCACTCTTCCTGTGACCCTTGTTCACTTCCCTCAGTGGGGTAGCATGTTCTTTCCTCCTTCAAAAGTCATCAATGAAGAACACTATTACACTTCTGAATGGAATGAGGAGGAGAGGCAGAAGGGGTTGCACCAGCAAAGTCTCAAGTTTGCTGAGAATAGCCGTTCTGAGAGAGGCAAGCGTGTGGCATCTGCCCCAACACCCTCAAATACAACTCCTACCCATGTCTAA 1584 0.4811 MGEIEGSPGSSMHGVTGREQTFISSVSSPMVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVNDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLLYELIRRAGATPFTAWRIAFFIPGWMHVIMGIVVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAAIFGMANLIARPFGGYASDLAARLFGMRGRLWALWTLQTLGGAFCIWLGRANSLPIAVLAMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTNRFSTSTGLSLMGVMIVCCTLPVTLVHFPQWGSMFFPPSKVINEEHYYTSEWNEEERQKGLHQQSLKFAENSRSERGKRVASAPTPSNTTPTHV* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2753 527 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Dod03g2753 527 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Dod03g2753 527 SUPERFAMILY MFS general substrate transporter 59 459 IPR036259 -
Dod03g2753 527 MobiDBLite consensus disorder prediction 492 527 - -
Dod03g2753 527 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Dod03g2753 527 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Dod03g2753 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Dod03g2753 527 MobiDBLite consensus disorder prediction 492 510 - -
Dod03g2753 527 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 524 - -
Dod03g2753 527 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 524 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2753 Dod-Chr3 59228056 59230189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2753 1 527 Inorganic Solute Cotransporters AT1G08090 78.679 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2753 K02575 - gmx:100807710 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2753 03 59228056 59230189 Dod03g2753 03 59228056 59230189 ECH
Dod10g1587 10 36650186 36652475 Dod03g2753 03 59228056 59230189 PCT