Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2743 ATGTCTGCATTGGAAGCTGTCATAAGCTGTGATGAGGAAAGGTTGAGGTTGGAAAAAGAAGCTGAAGCTTTGGCAGCACAGGATGACGGAGGTGGTGAATCTCTTGAACATATTTATGAACGATTGGAAGCCCTAGATGCAGCAACAGCAGAAAAGCGTGCTGCTGAAATTTTACATGGTCTTGGTTTCAACAAGAAAATGCAGGCACAGAAGACGCGCGATTTTTCTGGTGGCTGGAGAATGAGAATTGCATTAGCACGAGCTCTGTTTATGAACCCAACCATTCTTCTTCTTGATGAGCCAACCAATCATCTTGATTTGGAAGCTTGTGTGTGGCTCGAGGACAATTTAAAGAAGTTTGAACGTATTCTGGTTGTGATTTCACACTCTCAGGACTTCCTTAATGGTATCTGCACAAATATTATCCACATGCAAAACAAAAAACTGAAGCTCTACACTGGCAACTATGATCAGTATGTTCAGACTCGTTCCGAGTTGGAGGAAAACCAGATGAAGCAGTTCAGGTGGGAGCAGGAGCAGATTGCCTCAATGAAAGAATATATTGCCCGATTTGGTCATGGATCAGCAAAACTAGCTCGCCAGGCACAAAGTAAAGAGAAAACACTGGCAAAAATGGAACGGGGTGGACTCACAGAGAAAGTGGTCAAAGACAAAGTTTTGGTATTCCGCTTTACCGATGTGGGGAAACTTCCCCCTCCTGTTCTCCAGTTTGTTGAGGTGTCATTTGGTTACACTCCTGAAAACCTCATCTACAAGAACATTGATTTTGGAGTTGATTGTGACACTAGGATAGCGCTGGTTGGACCCAATGGTGCTGGGAAGAGTACGTTTCTGAAGCTAATGACAGGTGATTTAATTCCTACTGATGGCATGGTCCGTCGTCACAATCACCTTCGAATTGCTCAATATCACCAGCACTTAGCTGACAAGCTAGACCTGGAATTGTCTGCTCTCCAGTTTATGATCAAAGAATACCCTGGCAATGAGGAAGAGAAGATGAGGGCAGCCATTGGGAAGTTTGGGCTGTCAGGTAAAGCCCAGGTGATGCCAATGAAGAATTTGTCTGATGGGCAGAGGAGCCGTGTGATTTTCGCATGGCTAGCATGGAGGCAGCCTCATTTGCTACTTCTGGATGAGCCAACCAATCATTTGGATATCGAGACAATTGACTCATTGGCCGAGGCATTGAATGAATGGGACGGTGGCATGGTGCTTGTTAGCCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGTGCTGATCAAACTGTGACCAGGTGGGAGGGTGACATTATGGACTTCAAGGAGCATCTAAGGTCAAAAGCGGGCTTATCTGACTGA 1374 0.4527 MSALEAVISCDEERLRLEKEAEALAAQDDGGGESLEHIYERLEALDAATAEKRAAEILHGLGFNKKMQAQKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEDNLKKFERILVVISHSQDFLNGICTNIIHMQNKKLKLYTGNYDQYVQTRSELEENQMKQFRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPENLIYKNIDFGVDCDTRIALVGPNGAGKSTFLKLMTGDLIPTDGMVRRHNHLRIAQYHQHLADKLDLELSALQFMIKEYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKEHLRSKAGLSD* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2743 457 Pfam ABC transporter 40 103 IPR003439 GO:0005524
Dod03g2743 457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 242 457 IPR003439 GO:0005524
Dod03g2743 457 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 457 - -
Dod03g2743 457 Pfam ABC transporter 258 389 IPR003439 GO:0005524
Dod03g2743 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 436 IPR027417 -
Dod03g2743 457 Gene3D - 1 195 IPR027417 -
Dod03g2743 457 Gene3D - 204 455 IPR027417 -
Dod03g2743 457 CDD ABCF_EF-3 242 434 - -
Dod03g2743 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 172 IPR027417 -
Dod03g2743 457 SMART AAA_5 267 434 IPR003593 -
Dod03g2743 457 CDD ABCF_EF-3 75 148 - -
Dod03g2743 457 Pfam ABC transporter 142 218 IPR032781 -
Dod03g2743 457 PANTHER - 1 457 - -
Dod03g2743 457 Coils Coil 149 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2743 Dod-Chr3 59123815 59126455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2743 62 129 Calmodulin-binding Proteins AT2G36910 40.000 2.28e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2743 K06185 - gmx:100809491 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2743 03 59123815 59126455 Dod03g2743 03 59123815 59126455 ECH
Dod10g1582 10 36583865 36587793 Dod03g2743 03 59123815 59126455 PCT