Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2739 ATGCAAAGATCCGGCTATGGTAGCGACGGAATTTACAGGTCCCTAAGACCTTCCCTCCTCCTCCCCAACTACCCCAACACCTCCCTCACCTCCTTCCTCTTCCAAAACACCTCCTCCTTCTCTTCCAAACCCGCCCTCGTCGACGCCAACACCTCCCAAATTCTCACCTTCCACCACCTCAAGACCACAGTAGCCCAGCTCTCCCACGCCCTCCTCCTCCACGGCCTCAACAAAAACGACGTCGTTCTCCTCTTCGCCCCAAACAGCGTCCACTTCCCACTCTGCTTTCTCGCCGCCACCGTCATCGGCGCCGTCGTCTCCACCGCCAACCCTCTCTACACCGCCACCGAACTCTCCAAACAAATCAACGACTCCAACCCCAAGCTCCTCATCACCGTCCCGGAGCTATGGGAAAAAGCCAAACACTTCAAGTTCGAGCTCCCCGCAGTGTTCATCGATAACGACGCATCCGAAACGACAAGCTCGGAGGTCACTACTTTGCGCCGTTTGATGGACATGGCGGGGTCAACGACGGAGTTACCTGTAAACGACGTGAAACAGGACGATACGGCAGCGCTGTTGTATTCTTCGGGGACCACGGGGGCAAGCAAGGGCGTGGAGCTCACGCACGGGAATTTTATTGCAGCGTCCTTGATGATTGGCATGGATGATGACGTGGCGGGGGGCCGGGAGAAAAACGACAGCGTGTACCTGTGCGTTTTGCCGATGTTCCACGTGTTCGGGCTGGCGGTGATCTTGTACTCGCAGCTGAGGAGAGGGAGCACGGTGGTGTCGTTGAGGAGATTCGAGTTGGAGGCGTTTCTGAAGGCTATTGAGAAGCATAGGGTCACGAATCTTTGGGTCGTGCCTCCCATCTTGCTTGCTCTGGCGAAACAGAGGGTGGTGGAGAATTATGACCTTTCTTCGTTGAGGAGGATTAGTTCCGGCGCTGCTCCTCTCGGGAAAGACTTGATGCAAGACTGCGCCAGGCGTTTCCCTCATATTACTCTCCTTCAGGGGTATGGTATGACAGAAACTTGCGCTATTATTTCAGTGGAGAATCCAAGAGTTGGGATTCGTCAAAGTGGCTCAACAGGACTACTGGCTGCAGGAGTGGAAGCCCAAATAGTGAGTGTGGATACACAGAAGCCCCTCCCTCCTACACAGCTGGGGGAGATATGGGTACGGGGTCCTAATATGATGAAAGGTTATTATAAAAATTCTCAGGCCACAAGATTGACTATAGATAGAAAGGGGTGGGTACATACTGGAGATCTTGGATATTTTGATGAGGAAGGGCAACTTTATGTTGTTGACCGAATCAAAGAACTGATCAAGTATAAAGGTTTTCAGATTGCACCAGCAGAACTTGAAGGGGTTCTCATTTCTCACCCTGAAATACTAGATGCTGTTGTCATCCCATATCCGGATGATGAGGCTGGCGAGGTTCCAATTGCCTATGTTGTCCGTTCACCCAACAGTTCAATGACTGAAGAAGATGTTCGGAAGCTTGTTGCCAATCAGGTTGCACCATTCAAAAGATTGCGAAGGGTGACCTTCATCAGCAGTGTTCCTAAGACAGCTTCCGGAAAAATTCTCAGAAGAGAGCTTATTGCAAAAGCACGATCCAAAATATAA 1638 0.5159 MQRSGYGSDGIYRSLRPSLLLPNYPNTSLTSFLFQNTSSFSSKPALVDANTSQILTFHHLKTTVAQLSHALLLHGLNKNDVVLLFAPNSVHFPLCFLAATVIGAVVSTANPLYTATELSKQINDSNPKLLITVPELWEKAKHFKFELPAVFIDNDASETTSSEVTTLRRLMDMAGSTTELPVNDVKQDDTAALLYSSGTTGASKGVELTHGNFIAASLMIGMDDDVAGGREKNDSVYLCVLPMFHVFGLAVILYSQLRRGSTVVSLRRFELEAFLKAIEKHRVTNLWVVPPILLALAKQRVVENYDLSSLRRISSGAAPLGKDLMQDCARRFPHITLLQGYGMTETCAIISVENPRVGIRQSGSTGLLAAGVEAQIVSVDTQKPLPPTQLGEIWVRGPNMMKGYYKNSQATRLTIDRKGWVHTGDLGYFDEEGQLYVVDRIKELIKYKGFQIAPAELEGVLISHPEILDAVVIPYPDDEAGEVPIAYVVRSPNSSMTEEDVRKLVANQVAPFKRLRRVTFISSVPKTASGKILRRELIAKARSKI* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2739 545 Gene3D - 443 544 IPR045851 -
Dod03g2739 545 SUPERFAMILY Acetyl-CoA synthetase-like 21 543 - -
Dod03g2739 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Dod03g2739 545 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Dod03g2739 545 Pfam AMP-binding enzyme 36 447 IPR000873 -
Dod03g2739 545 CDD 4CL 21 537 - -
Dod03g2739 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 544 - -
Dod03g2739 545 Gene3D - 10 442 IPR042099 -
Dod03g2739 545 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2739 Dod-Chr3 59099787 59103913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2739 1 545 Monolignol Biosynthesis Gene Families AT4G05160 65.756 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2739 K01904 - gmx:100808944 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2739 03 59099787 59103913 Dod03g2739 03 59099787 59103913 ECH
Dod10g1579 10 36517234 36521878 Dod03g2739 03 59099787 59103913 PCT