Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2737 ATGGGAAGAGCTCCTTGTTGTGACAAGGCAAATGTTAAGAGAGGGCCATGGTCACCAGAAGAAGACTTACAGCTGAAGGAGTACATAGAGAAGCATGGCACTGGAGGGAATTGGATTGCTCTTCCTCAGAAAGCTGGTCTGAAGAGATGTGGGAAAAGTTGCAGACTAAGATGGCTTAACTATCTGAGGCCTAACATTAAGCATGGAGAATTCTCAGAAGAGGAAGACAGAATTATTTGCAGCCTCTATGTTAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAGTTGCCAGGCAGGACTGACAATGATATCAAGAACTATTGGAACACAAAGTTGAAGAAAAAGCTCATGGGGTTGCTTCCTCCATCTCATCATCAGAGAGTTACTAAACCTCCATTTCCGTCTCCTAATCAAAACCAAAACCCACCACAACCACCACCCTCTCCTTCATCATCAATGTACATAGACTACTTTGGCTCTTATTACACCCCAGAAACAACCACATCTTTCACTTGCCTTGATCCCATTATTTCACTTCCTCCAAGTGACTATGAAAGCACAAACTGCACAACAACCTCATCAATTTCACACCCCTTTTACCAAAACCAAGAGTCCATGGTTAGTGTTGGCCGTGGTGTTAGCCCCATGCAATATAATTACCACAACCACCCCATAAGAGACAGCATGTTCATGTTTGGAAGTGAAGGAAGTTGCAGTTCCTCTGATGGGAGCTGCAGTCAGGTGAGCCATGGAAGGGAAATCAAGCAAGAGGAAATGGGTGGTTACCATAGCTGCTACATGTCTAGCACATTTGATGAGCACAGCAATAACAAGTTCATGCTTGGTTACAACAGCATTAATGATTGTGGTGAAAATATTAACCAATGGACGGATGAAAAGTGCTTTGGTCAAACACAAATCCCCTTGGACTATGATCTTGAGGATATTAAGCAATTGATCAGTGTTAGTAGCAGTAGCTTCAATATTGATGAAATCAAGGGTGAGGAGGAGAAAGCCATGTACTACTACTACTACTACTGA 1044 0.4282 MGRAPCCDKANVKRGPWSPEEDLQLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSEEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPPSHHQRVTKPPFPSPNQNQNPPQPPPSPSSSMYIDYFGSYYTPETTTSFTCLDPIISLPPSDYESTNCTTTSSISHPFYQNQESMVSVGRGVSPMQYNYHNHPIRDSMFMFGSEGSCSSSDGSCSQVSHGREIKQEEMGGYHSCYMSSTFDEHSNNKFMLGYNSINDCGENINQWTDEKCFGQTQIPLDYDLEDIKQLISVSSSSFNIDEIKGEEEKAMYYYYYY* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2737 347 Gene3D - 7 68 - -
Dod03g2737 347 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Dod03g2737 347 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Dod03g2737 347 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Dod03g2737 347 Gene3D - 69 142 - -
Dod03g2737 347 PANTHER OS09G0431300 PROTEIN 1 327 - -
Dod03g2737 347 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dod03g2737 347 CDD SANT 16 62 IPR001005 -
Dod03g2737 347 SMART sant 13 64 IPR001005 -
Dod03g2737 347 SMART sant 67 115 IPR001005 -
Dod03g2737 347 MobiDBLite consensus disorder prediction 124 151 - -
Dod03g2737 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Dod03g2737 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Dod03g2737 347 MobiDBLite consensus disorder prediction 136 151 - -
Dod03g2737 347 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Dod03g2737 347 CDD SANT 70 111 IPR001005 -
Dod03g2737 347 PANTHER TRANSCRIPTION FACTOR RAX3 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2737 Dod-Chr3 59075476 59077835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2737 1 119 MYB Transcription Factor Family AT5G57620 89.916 3.00e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod03g2737 Myb_DNA-binding 4.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2737 K09422 - gmx:100808114 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2737 03 59075476 59077835 Dod03g2737 03 59075476 59077835 ECH
Dod10g1578 10 36504265 36506897 Dod03g2737 03 59075476 59077835 PCT