Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2721 ATGTCAATCGTCAACTTTCTATATATTACAATTGGACCCTTTCACCATTCAAGTTCCACTACCATGGACCCGAGTTATGTTCATCAAGAGAGTAGTACACTAGCACACATCAATGGCTTTGAGCTGCACGACTTCATCGATGATCCCAACTCTGATCAGTTTATCAATTTGGTTCGTGGGGAGAACAAAGATGCTAGTTGTGACTTTGATTATTCTGGCCTTATCAATGGTTGCTTACTTGATAACCCCCTTTTGTCATGGCCACAAAACCCATTTGATCAATGCAATAATGATGCTGTGAATGTTTGCGATCCAAGCCCTGCACTTAGCTCCTTCTCTTGTTTTGAAGGGGAAGTGAAAGGAGAAGAAGAGGGAGGAGAAGAAAACGATGCGGAGGGCTCTTCTGCAACAACCACCACCACTGCAACCACAAGTCCTAATAATACAAAACCAAGGCCTAAAACTGATAGGTCCAAGACCTTGATTTCAGAGAGGAGGAGGAGGGGCAGAATGAAGGAGAAGCTTTATGCATTGCGTTCTTTGGTTCCCAACATAACTAAGATGGATAAGGCCTCTATAATTGGAGATGCTGTTTCATATGTGCATGTGCTTCAAGCACAAGCTAAGATGCTGAAGGCTGAGGTTGCAGGACTAGAAGCATCCTTGTTAGTGTCAGAAAAATATCAAGGATCAATTCAAAACCCCATAAAGTTTCAATTCACCAACAACAGCCGTCCAATTTGCAAGAAGATCATCAAGATGGACATGTTTCAAGTGGATGAAAGAGCGTATTATGTGAAAATTGTGTGCAATAAAGGAGAAGGGGTGGCTGCCTCACTGTACAGGTCTCTTGAGTCTCTGGCAGGCTTCAATGTACAGAATTCAAACTTGGTCACAGCTTCTGACAGTTTCCTACTTACATTTTTGTTGAGGGTGAATGGTTCTGTGCCAGAAGTTAACCTGCCCAATTTGAGATTATGGGTGACTGGGGCTTTTCTAAACCAAGGATTTGAATTCATACCATCTTTTCTTGCTTGA 1038 0.4239 MSIVNFLYITIGPFHHSSSTTMDPSYVHQESSTLAHINGFELHDFIDDPNSDQFINLVRGENKDASCDFDYSGLINGCLLDNPLLSWPQNPFDQCNNDAVNVCDPSPALSSFSCFEGEVKGEEEGGEENDAEGSSATTTTTATTSPNNTKPRPKTDRSKTLISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVSYVHVLQAQAKMLKAEVAGLEASLLVSEKYQGSIQNPIKFQFTNNSRPICKKIIKMDMFQVDERAYYVKIVCNKGEGVAASLYRSLESLAGFNVQNSNLVTASDSFLLTFLLRVNGSVPEVNLPNLRLWVTGAFLNQGFEFIPSFLA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2721 345 SMART finulus 161 210 IPR011598 GO:0046983
Dod03g2721 345 Gene3D - 147 221 IPR036638 GO:0046983
Dod03g2721 345 MobiDBLite consensus disorder prediction 131 151 - -
Dod03g2721 345 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 36 341 - -
Dod03g2721 345 MobiDBLite consensus disorder prediction 118 166 - -
Dod03g2721 345 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 36 341 - -
Dod03g2721 345 Coils Coil 201 221 - -
Dod03g2721 345 MobiDBLite consensus disorder prediction 152 166 - -
Dod03g2721 345 Pfam Helix-loop-helix DNA-binding domain 162 205 IPR011598 GO:0046983
Dod03g2721 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Dod03g2721 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 220 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2721 Dod-Chr3 58845394 58847675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2721 34 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 52.215 2.33e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod03g2721 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2721 - - gmx:100805451 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1565 10 36355578 36356849 Dod03g2721 03 58845394 58847675 PCT