Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2707 ATGATGTTGGTGCCACCTCCGTGGCTGGAACGACTATTGTCGACCACATTCTTCTCCATATGCGAAGCACACATCAACGCACCCAGAAACGAATGCAACATGTATTGCCTCGATTGTGGGGACCAAGCATTCTGCTTTTACTGCAAATCATCTTGGCATAAGGATCATCAAGTAATTCAAATAAGGAGGTCGTCCTATCATGATGTTGTGAGGGTTACGGAGGTTCAGAAGGTTTTGGACATAAGTGGGGTTCAGACGTATGTGATCAACAGTGCTAGAGTTCTTTTCCTGAATGAGAGGCCTCAAAATCAGCCTAAGACCAATAATGTTGCCAGTAGTGGTAAAGGCAACTCCCATTTGTGTGAAATATGCAGAAGAAATCTCTTGGACCCTTTTCGTTTCTGCTCTCTGGGATGCAAGCTTGCAGGGATAAAGAAAAATGGGAATGCAAGCTTTTTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAGAATGCAGGAAGGAATGCCAAGAAGGTTGCCATCAAATGAATTAGAAGATGAAGAACTGCGTGAAGGAATCCACAAACATGTATACCAAAGCACGCCTTGTAGTCATCCTCGGCCATCTCCACAAGCTTGCTCAAATTCAAGGAGAAGAAAGGGAATACCTCAAAGGGCACCTTTAGGGACCTAA 675 0.4415 MMLVPPPWLERLLSTTFFSICEAHINAPRNECNMYCLDCGDQAFCFYCKSSWHKDHQVIQIRRSSYHDVVRVTEVQKVLDISGVQTYVINSARVLFLNERPQNQPKTNNVASSGKGNSHLCEICRRNLLDPFRFCSLGCKLAGIKKNGNASFFLSAKKDEEIGRMQEGMPRRLPSNELEDEELREGIHKHVYQSTPCSHPRPSPQACSNSRRRKGIPQRAPLGT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2707 224 Pfam PLATZ transcription factor 62 141 IPR006734 -
Dod03g2707 224 MobiDBLite consensus disorder prediction 196 212 - -
Dod03g2707 224 MobiDBLite consensus disorder prediction 192 224 - -
Dod03g2707 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 223 - -
Dod03g2707 224 SUPERFAMILY B-box zinc-binding domain 20 63 - -
Dod03g2707 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2707 Dod-Chr3 58706696 58708445 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod03g2707 PLATZ 2.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2707 - - aprc:113859745 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2707 03 58706696 58708445 Dod03g2707 03 58706696 58708445 ECH