Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2661 ATGAGGCTGCAGACATATGCGGGTCTTAGCTTGGTTGCAACTCTGGCTATTACGTATCATGCATTTAGCAGTAGTAGAGGCCAGTTTCATCCTGCAATGGTGTATCTGGAAGGTTCCAGCATCAGTTTTCTGCTTCTTCTCAACATGATTCTGGTAATCATGTACATGCTATGGAAGTTAACTAAAAGGGTCTTCCTTGGTTCACTCCGGGAGGCTGAGGTTGAGAGGCTTAACGAGCGATCGCGGCAAGAGGTTATGCAAATCGTGTCTGCAGTTACTCTTTTTAGGCAGGACTTCTCTGTTACATTGATTGTCATGGTCACAGCACTCTTGTTGATTAAGGCTTTGCATTGGTTGGCTCAGAAGAGAGTTGAGTACATAGAGACAACTACCTCCATGTCCATCTTGTCTCATGTCCGAATTGTATCTTTTATGGTTTTCCTTCTTCTTCTAGATGGCCTCCTTTCGTATAGTTCCCAGAAACATTTGATAGCATCGTTGCAGGCTTCAACTTCACTATTATTTTGTTTTGAGTACATGACACTGGCAACAACAACAGTATCAATTTTTGTAAAATATATTTTTTATGTCAAAGAAATGCTCATGGAGGGACAGTGGGAAAGGAAGCCAGTCTTCACATTTTACCTGGAACTTGTTAGGGACTTGGTTCACATGTCTGTGTGCTTCTTTTTTCTAATTTTCTTAAAATACGGTATACCTCTGCACTTAATAAGGGAGCTGTTAGGGACAATTAGGAAAATCAAAATTCGCGTCGCAGATTACATACGTTTTTGCAAGATGACTTCAAATATGAATGATCGGTTTCAAGATGCAACCCCAGAGGAGCTGAATGCAAGTGATGCAACCTGCATTATATGTCGTGAAGAGATGACTACTGCCAAGAAACTTATATGCGGACATCGTCTTCATGTTCATTGCCTCCGTTCATGGCTTCAGCGGTGGCATACTTGTCCTACCTGCAGAGCACCGGTTGTACCACTAACTGCTGCTGGTGGACAGCAGCAAGCATCACATTCAGATGCTCATCGACGACACGCTACTGGAAGCACAGCTCAAGAAACTGATAGTTTGAGTCAGCATCAAGCCAGACTCCAAGCTGCTGCTGCAGCAGCTTCAATATATGAGAAGTCTTGTGTTTACCCCTCTGCAAATTCTGTAGTATGCTCTCCTGGATACCTTCTATATCAACCAATTCAAAGATCTGTTGTTGAATCTTCTAGTACTGAGCTTAATGGAGAACAACAATCCAGTGAACAAGCACAAGCACAATAG 1293 0.4261 MRLQTYAGLSLVATLAITYHAFSSSRGQFHPAMVYLEGSSISFLLLLNMILVIMYMLWKLTKRVFLGSLREAEVERLNERSRQEVMQIVSAVTLFRQDFSVTLIVMVTALLLIKALHWLAQKRVEYIETTTSMSILSHVRIVSFMVFLLLLDGLLSYSSQKHLIASLQASTSLLFCFEYMTLATTTVSIFVKYIFYVKEMLMEGQWERKPVFTFYLELVRDLVHMSVCFFFLIFLKYGIPLHLIRELLGTIRKIKIRVADYIRFCKMTSNMNDRFQDATPEELNASDATCIICREEMTTAKKLICGHRLHVHCLRSWLQRWHTCPTCRAPVVPLTAAGGQQQASHSDAHRRHATGSTAQETDSLSQHQARLQAAAAAASIYEKSCVYPSANSVVCSPGYLLYQPIQRSVVESSSTELNGEQQSSEQAQAQ* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2661 430 SMART ring_2 290 327 IPR001841 -
Dod03g2661 430 PANTHER RING ZINC FINGER PROTEIN 1 351 - -
Dod03g2661 430 SUPERFAMILY RING/U-box 270 334 - -
Dod03g2661 430 MobiDBLite consensus disorder prediction 411 430 - -
Dod03g2661 430 Pfam Ring finger domain 289 328 IPR001841 -
Dod03g2661 430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 334 IPR013083 -
Dod03g2661 430 CDD RING-H2_synoviolin 287 328 - -
Dod03g2661 430 MobiDBLite consensus disorder prediction 338 366 - -
Dod03g2661 430 PANTHER - 1 351 - -
Dod03g2661 430 ProSiteProfiles Zinc finger RING-type profile. 290 328 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2661 Dod-Chr3 58165345 58168216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2661 1 398 C3H Transcription Factor Family AT3G16090 66.505 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2661 K10601 - gmx:100816441 592.038