Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2652 ATGCTGCTATCAGTGGCGCCAACTTCTCGTGATACCCAACAAATCACTACACCAAAAACCAAACCCAAGCAGAATTCCCAAACTACCCATATCTTCAAATCAAGATTACCAGACATACCCATCACGAACACCATCCCTCTCCACACTTACTGCTTCCAAAAGCTCCCCAAAGTCGCCAACCGCCCATGCCTCATCGCCGCCGCCACCGGCAAGACCTACACCTATGCCGACACCCACCAAGCTTCTAGAAGCTTCGCTGCCGGTCTCTACAACCTCGGAGTCCGAAAAGGTGACGTCATCATGATCCTCCTCCCAAACTCCCCGGAATTTGTCTTCTCCTTCATGGCGGCCTCCATGCTGGGCGCCGCCGCCACCACCGCGAACCCTGCCTACACCTCCGCTGAAATCACGAAGCAAATCATAGCTTCCAAGGCCAAAATCGTCATTACACACGCCATGCACGTCGACAAACTCAAACAAGAAGAAGAAGACAACACCTTCACGGTGATAACAGTGGACGACCCACCGGCGAATTGCATGAAATTCTCAGCGGTTTTCGGCGATGATGGGGAGCTGCTGCCGGAGGAGGCGATCGACCCCGATGACATGGTGGCACTACCATTCTCCTCCGGCACAACGGGTTTACCCAAAGGTGTGGTTCTAACACACAAGAGCATGGTAACGAATACGGCTCAAACAGTTGATGGAGAGAACCCTAACTTGTACTACAAGGAAGAGGACGTGGTGCTTTGTCTGTTGCCATTGTCTCACATATATGCGATGCACTGTGTGATGCTTTGTGCATTGAGGAGAGGTTGTGCAGTGTTGCTAGTGGAGAGGTTTGAAATAAGGAAGTTGTTGGAGTTGATAGAGAGGCACAGGGTTTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGAATCTGGTCAAGAACCCGGCTGTGGCAGAGTATGACCTTAGCTCTATTCGCATTGTGATGTCTGGGGCTGCACCGCTCGGGAAGGATCTAGAGGAGGCTTTTCGGAACAGGTTGCCACAAGCAATTCTCGCACAGGCCTATGGGATGACGGAGTCAGGGCCAGTGATTTCGATGTCGTTGGGGTTTGCAAAACATTCAGTCCCACCAAAGTCAGGCTCCTGCGGCACTATAGTCAGAAATGCAGAGTTGAAGGTTATTGACCTTGAAACTGGTTCTTCTCTCCCCTATAACATGCCCGGTGAGATTTGCATCCGAGGCCAACATATCATGAAAGAATACCTGAATAATAAGAGGGCCACAGCAGCAACTATTGATGTAGAGGGTTGGCTTCATACCGGTGATATTGGCTATGTAGATTATGATGATGATATTTTCATCGTTGATCGGGTGAAGGAACTCATCAAATTTAAAGGCTTCCAGGTGGCCCCGGCAGAACTTGAAGGCCTTCTTGTGAGCCACCCTTCCATTGCAGATGCTGCTGTTGTCCCGCTAAAAGATGATGTTGCGGGCGAAGTTCCAGTTGCTTTTGTGGTGAGATCATCAAACGGTTTTGATCTTACCGAAGGGGATGTAAAGGAGTTTATAGCTAAACAGGTAGTCTTTTACAAAAGACTCCACAGAGTGTACTTCATTCATGCAATTCCAAAGTCTCCATCAGGAAAGATATCAAGAACAGAACTCAAAGCAAAGCTGGCTAACACCACCTAG 1686 0.4976 MLLSVAPTSRDTQQITTPKTKPKQNSQTTHIFKSRLPDIPITNTIPLHTYCFQKLPKVANRPCLIAAATGKTYTYADTHQASRSFAAGLYNLGVRKGDVIMILLPNSPEFVFSFMAASMLGAAATTANPAYTSAEITKQIIASKAKIVITHAMHVDKLKQEEEDNTFTVITVDDPPANCMKFSAVFGDDGELLPEEAIDPDDMVALPFSSGTTGLPKGVVLTHKSMVTNTAQTVDGENPNLYYKEEDVVLCLLPLSHIYAMHCVMLCALRRGCAVLLVERFEIRKLLELIERHRVSVAMVVPPLVLNLVKNPAVAEYDLSSIRIVMSGAAPLGKDLEEAFRNRLPQAILAQAYGMTESGPVISMSLGFAKHSVPPKSGSCGTIVRNAELKVIDLETGSSLPYNMPGEICIRGQHIMKEYLNNKRATAATIDVEGWLHTGDIGYVDYDDDIFIVDRVKELIKFKGFQVAPAELEGLLVSHPSIADAAVVPLKDDVAGEVPVAFVVRSSNGFDLTEGDVKEFIAKQVVFYKRLHRVYFIHAIPKSPSGKISRTELKAKLANTT* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2652 561 Pfam AMP-binding enzyme C-terminal domain 471 547 IPR025110 -
Dod03g2652 561 CDD 4CL 36 553 - -
Dod03g2652 561 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 30 556 - -
Dod03g2652 561 SUPERFAMILY Acetyl-CoA synthetase-like 42 559 - -
Dod03g2652 561 Gene3D - 457 560 IPR045851 -
Dod03g2652 561 Pfam AMP-binding enzyme 59 462 IPR000873 -
Dod03g2652 561 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Dod03g2652 561 MobiDBLite consensus disorder prediction 1 28 - -
Dod03g2652 561 Gene3D - 22 456 IPR042099 -
Dod03g2652 561 PANTHER 4-COUMARATE--COA LIGASE 3 30 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2652 Dod-Chr3 58076919 58081179 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2652 28 469 Monolignol Biosynthesis Gene Families AT1G65060 65.618 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2652 K01904 - gmx:547492 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2652 03 58076919 58081179 Dod03g2652 03 58076919 58081179 ECH