Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2642 ATGGCAGCGGCGAGCGGGAACAGTGTGGCGCCGTTCCTGAGCAAGACGTACGACATGGTGGACGACTCGTCCACCGACTCGGTGGTTTCGTGGAGTGACAACAGCAACAGCTTCGTCGTTTGGAACGTCCCCGAATTCGCAAGGGACATCTTGCCCAAATACTTCAAGCACAACAATTTCTCCAGCTTCGTTCGCCAGCTCAACACTTACGGCTTTAGAAAGGTTGATCCTGACCGCTGGGAATTTGCAAATGAAGGGTTTTTAAAGGGAGAGAAACAACTTTTGAAGAATATCAGTAGGCGGAAGACTACTCATGTTAATGGGAGCAGTCAACAACCATCTCAGGTGCAAAACTCACCTGTTGGTGGGGCATGCGTTGAAGTGGGGAAGTTTGGAATTGAGGAAGAGATTGAAAGACTGAAGAGGGATAAGAATGTTCTTATGCAGGAACTTGTTAGGTTAAGACAGCAGCAACAAACAACTGATAACCAGTTGCAAACTGTTGGGCAACGGGTTCAGGTAATGGAGCAGCGTCAGCAACAGATGATGTCATTCCTGGCGAAAGCAATGCATAGTCCTGGCTTCTTGGCTCAGTTTGTACAGCAGCAGAATGAAAGTAACAGACAAATCACTGGAGGAAATAAAAAGAGGAGGCTCCACAGGCAGGACGAAGATGATTTAGCCACCAAGCATCTCCATAATACTCTTGATGGACGTGTTGTCAAGTATCAGCCTTCTATAAATGAAGCAGCAAAAGCATTATTATGCCAGATATTGCAAATGAACAACTCTACAACGATGGACTCATCGGTTAAGAATCCTGACGCATTCCTTATTGACGATGTTCCTTTGGCCATTCCATTAGATAGCAGCAGTTCGTCCACTCGTGTTTCTGGTGTTACCCTTTCTGAGGTTCCGCCTACTTCTGCTCAGTCATATGTGGCCGTAGAGTCACAATTTCCTGTTAGTTGTATGACCAGTAACATGGCTGAGGTTCAATCTTCACCTGCGGTGTTGACTGACTGTGTCAAAGCAACTGAATTTCCAGACTTAACTGCACATAATTGCCAAGGGAATGTTTTGGATTTTGGTAAAGTTCAAGGACTGGAAACTGAAAGCAGCTTCATGACGCCTGATCTGAGTTTTGTGGGGTCTGACACTGGAAATGTGGAGGATATAGAAATGATGTCAACTGTTTTAGACGGTACACAGCCTGTAGAAACTGATGCCTTTTCACCTGATGCAAATGGAATTTCTAAGCTTCCGTCAATCAATGATGAATTCTGGGAACTGTTTTTTAGGCCAAGCCCACTCTCTGGAGATACAGATGAAGTTAAATGTAGCTCTCTGGGATATGATGTGACTGATGACCAGGAACTGTCATCAGAAAAGGAGATTCAACAGGAAATTGCTGATAAGAAACAGCATATTGACCATCTTACTCAACAGATGGGACTTCTTGCATCGAAGTCTTAA 1476 0.4478 MAAASGNSVAPFLSKTYDMVDDSSTDSVVSWSDNSNSFVVWNVPEFARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLKGEKQLLKNISRRKTTHVNGSSQQPSQVQNSPVGGACVEVGKFGIEEEIERLKRDKNVLMQELVRLRQQQQTTDNQLQTVGQRVQVMEQRQQQMMSFLAKAMHSPGFLAQFVQQQNESNRQITGGNKKRRLHRQDEDDLATKHLHNTLDGRVVKYQPSINEAAKALLCQILQMNNSTTMDSSVKNPDAFLIDDVPLAIPLDSSSSSTRVSGVTLSEVPPTSAQSYVAVESQFPVSCMTSNMAEVQSSPAVLTDCVKATEFPDLTAHNCQGNVLDFGKVQGLETESSFMTPDLSFVGSDTGNVEDIEMMSTVLDGTQPVETDAFSPDANGISKLPSINDEFWELFFRPSPLSGDTDEVKCSSLGYDVTDDQELSSEKEIQQEIADKKQHIDHLTQQMGLLASKS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2642 491 Coils Coil 463 483 - -
Dod03g2642 491 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 465 IPR027725 -
Dod03g2642 491 PRINTS Heat shock factor (HSF) domain signature 50 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g2642 491 PRINTS Heat shock factor (HSF) domain signature 12 35 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g2642 491 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g2642 491 SUPERFAMILY "Winged helix" DNA-binding domain 7 101 IPR036390 -
Dod03g2642 491 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 2 465 - -
Dod03g2642 491 Coils Coil 130 157 - -
Dod03g2642 491 Pfam HSF-type DNA-binding 12 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g2642 491 ProSitePatterns HSF-type DNA-binding domain signature. 51 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g2642 491 Gene3D - 4 103 IPR036388 -
Dod03g2642 491 SMART hsfneu3 8 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2642 Dod-Chr3 57971604 57974831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2642 7 491 HSF AT5G16820 51.503 1.22e-152 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod03g2642 HSF_DNA-bind 1.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2642 K09419 - gmx:100793665 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2642 03 57971604 57974831 Dod03g2642 03 57971604 57974831 ECH