Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2637 ATGGGGAGAACACCAAGCCGTGAAGATGAAAGTGACTTGAAGAAGGGTCCTTGGACCCCAGAAGAGGATAGAATATTGGTGGATTACATAGAGAAACACGGCCATGGGAGTTGGAGAGCACTTCCAAAGCTTGCAGGGTTGAACAGGTGTGGCAAGAGTTGCAGGCTAAGGTGGACTAACTATTTGAGGCCTGATATCAAAAGAGGAAAATTCTCTGAGGAAGAAGAGCAAATCATCATCAATTTGCATGCAGTTCTTGGGAATAAGTGGTCGGCTATAGCAGGTCATCTGCCAGGGAGAACAGACAATGAAATCAAGAATTTCTGGAACACTCATCTGAGGAAAAAGCTTCTCCAAATGGGGTTAGATCCAGTGACACATCGCCCAAGGACAGATCACCTTGATCTCCTATCCTATCTTCAGCAGTTGCTGGCTGCTGCAAACGTTGTCAGTGGCCTCACAAACACTAATTGGGACATCAATGCTCTAAGGCTCAACTCAGATGCCACACAACTAGCCAAACTCCAAATGCTGCTTCAAGTCCTTGGTTCCAATCCTGCCCAAAATATGGAGTCACTCAATCCATTTGGACCAATACCTTCACTGCCAAATGGTTTATATGAAGCTCTAGGATTGAATCAGTCCAAGCTCCAAAACCTTTCTAATGGTTCAGCTGGTTTTCCTTCTCAAAACCAGCCAAATTTCCAAAACTTTGAGGCCCTTATGGAGCCAGGACAATTTCCAAATAGTAGTTGCATGAAATCTCAAGAGGTTCATGATGAGCAACTTGATGCCACATGTTCTCCCACAACACCATTCAATTTGCTTCCAAATCTTGTTTCAGCCTCATCACCTGAATGTTCCGTTGCCAAGCAAATGGAAAGCAATAATGTGAACCCAAATGAGTGCTCCATCCCTTCTTCTTCTTCCACTTCAACCACCTTTGAGATGTTGGCAGATTTCATGTATGAAGAAGCAAGCGATGCTTATTGGAAAGATATCATAGACCAAGATTCTAACCAGCCATAG 1029 0.4402 MGRTPSREDESDLKKGPWTPEEDRILVDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSEEEEQIIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLRKKLLQMGLDPVTHRPRTDHLDLLSYLQQLLAAANVVSGLTNTNWDINALRLNSDATQLAKLQMLLQVLGSNPAQNMESLNPFGPIPSLPNGLYEALGLNQSKLQNLSNGSAGFPSQNQPNFQNFEALMEPGQFPNSSCMKSQEVHDEQLDATCSPTTPFNLLPNLVSASSPECSVAKQMESNNVNPNECSIPSSSSTSTTFEMLADFMYEEASDAYWKDIIDQDSNQP* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2637 342 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Dod03g2637 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 338 - -
Dod03g2637 342 Gene3D - 70 117 - -
Dod03g2637 342 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Dod03g2637 342 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Dod03g2637 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Dod03g2637 342 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dod03g2637 342 SMART sant 67 115 IPR001005 -
Dod03g2637 342 SMART sant 14 64 IPR001005 -
Dod03g2637 342 Gene3D - 12 68 - -
Dod03g2637 342 PANTHER MYB TRANSCRIPTION FACTOR 3 338 - -
Dod03g2637 342 CDD SANT 70 113 IPR001005 -
Dod03g2637 342 CDD SANT 17 62 IPR001005 -
Dod03g2637 342 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Dod03g2637 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2637 Dod-Chr3 57918504 57920794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2637 1 336 MYB Transcription Factor Family AT5G16770 50.843 2.62e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod03g2637 Myb_DNA-binding 1.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2637 K09422 - gmx:547488 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2637 03 57918504 57920794 Dod03g2637 03 57918504 57920794 ECH