Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2631 ATGAAAGAACTTTGTAGAAACTTCCAGCGTGGCAGCTGTCAATATGGAGATAGGTGTAAATTTTCGCATGCTGTGCAGCAACAACAGCAGCGAAGGCCTAACAATGTTCATGGCTTTGGGGGCCTGGCACAGGGTGGTTCTTTTCAACACCAAAATGCAAACAACAACAACCCTTTTGGATTTGGGTCCCAAGCTGGTTCACACTCACTCCAACAGCAGCAGCAGCAAAAGACCAATCCTTTTGGGTTTGGCATGCAGAACAACAACCTGCAATCAAAAGGGGGCCCTCAACACCAATTCAAGCCTTTTGAAAACAAATGGAGCCGGCAGTCATCCACACCCCAGAATAGTGCTTCACGCCAATCTGATAAGAACACCCAGCCATCAAATCATGAGTGCACAGATCCTGAGGTCTGCAAGCGCCAGATTGCAGAAGATTTTAAGCAAGAGAAACCGCTTTGGATACTTACATGCTACGGTCATGCTAAAGGCGCTCCTTGTGACATTGTTGGTGATATTAGCTATGAAGAATTGAGGGCAGCAGCTTATCAGGATGCTAAGCAGGGAATGAGCTTGCAATCAATAGTTGAGAAAGAGAGAAATATACTAAAATCCAAGTTGGCTGAGTTTGAGAAACTACTTTCTGAACCCTACACAATGCCACTGAATTCTTCTCTTGACAGTCAAAAGCACCAATCCGTTGGAACTAATGCAAATCCTTTTTCAACAACTACACAAAATAGCGGTCCTTTGTCAGTCTCAAGCTTTAGCCAACTTGGTGCTTCATTGAACTTGGGTGTTGAAAGGCCCTCTGCACCGCTAATGAACACTCCGGCACAGTCTAGTTTCTTTGGAGGTGGAGGAAACACTTTGGCACCCAACACTGCAAACCTAGGTGGCGGAGGCTTCTCTGGGGCTCAAAGCAGTCCCTTTGGCAGTGGCTTCTCAGGTGCTCAAAGCAGCCCCTTTGGCAGCGGCTTCTCAGGTGCTCAAAGTGGCAGTGGCTTCTCAGGTGCTCAAGGCGGTCCTCTTTTCTACTACACAAGCAGGGTTGACATCGTTTCCAACTTCAACTTCTCAGCAGTCATCATTTGCCTTCAATGA 1104 0.4692 MKELCRNFQRGSCQYGDRCKFSHAVQQQQQRRPNNVHGFGGLAQGGSFQHQNANNNNPFGFGSQAGSHSLQQQQQQKTNPFGFGMQNNNLQSKGGPQHQFKPFENKWSRQSSTPQNSASRQSDKNTQPSNHECTDPEVCKRQIAEDFKQEKPLWILTCYGHAKGAPCDIVGDISYEELRAAAYQDAKQGMSLQSIVEKERNILKSKLAEFEKLLSEPYTMPLNSSLDSQKHQSVGTNANPFSTTTQNSGPLSVSSFSQLGASLNLGVERPSAPLMNTPAQSSFFGGGGNTLAPNTANLGGGGFSGAQSSPFGSGFSGAQSSPFGSGFSGAQSGSGFSGAQGGPLFYYTSRVDIVSNFNFSAVIICLQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2631 367 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Dod03g2631 367 MobiDBLite consensus disorder prediction 45 133 - -
Dod03g2631 367 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 3 23 IPR000571 GO:0046872
Dod03g2631 367 Gene3D - 1 59 - -
Dod03g2631 367 SUPERFAMILY CCCH zinc finger 3 27 IPR036855 GO:0046872
Dod03g2631 367 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 71 323 - -
Dod03g2631 367 PANTHER MAKORIN-RELATED 2 76 IPR045072 -
Dod03g2631 367 PANTHER MAKORIN-RELATED 71 323 IPR045072 -
Dod03g2631 367 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 76 - -
Dod03g2631 367 MobiDBLite consensus disorder prediction 28 137 - -
Dod03g2631 367 SMART c3hfinal6 2 25 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dod03g2631 zf-CCCH 2.6e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2631 K14321 - gmx:100814339 381.333