Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2630 ATGGGAGGTGAAGGAGGTGCAGTTGGGTTTGGAGGCCTCAATGAAGAAGAAATGATAAAGGAAGAAGAGAACAAGTGGCCACCATGGCTGAAGCCACTTCTCAAAACAAGCTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAGAGTGAATGCAACATGTATTGCTTGGATTGTATAAATGGGGCCCTTTGTTCTGCCTGTTTGGCTTCCCACAAAGAACACAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACCTACATTATAAATAGTGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGAGCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATCGTTGGAACATCCAAAAAACTCCGGAAGAAGAAAATGCTAGGTGAGACAGATAGGTCTGATGGTGAAGAATCAATGAATGGCATTAGTGGTGCAATTGCCAGAAACAGAATCCACAGCTTCACACCTTCAACACCACCCCCAACAGTGGTGAATTACAGAACTACCAAGAGGAGGAAAGGAGTTCCACATAGAGCTCCTATGGGGGGAGGGCTTACTATAGAATATTAA 687 0.4454 MGGEGGAVGFGGLNEEEMIKEEENKWPPWLKPLLKTSFFVQCKVHADSHKSECNMYCLDCINGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKLRKKKMLGETDRSDGEESMNGISGAIARNRIHSFTPSTPPPTVVNYRTTKRRKGVPHRAPMGGGLTIEY* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2630 228 MobiDBLite consensus disorder prediction 189 204 - -
Dod03g2630 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 223 - -
Dod03g2630 228 Pfam PLATZ transcription factor 82 153 IPR006734 -
Dod03g2630 228 MobiDBLite consensus disorder prediction 187 228 - -
Dod03g2630 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2630 Dod-Chr3 57850367 57853037 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod03g2630 PLATZ 3.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2630 - - gmx:100810757 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2630 03 57850367 57853037 Dod02g1273 02 15435104 15437319 ECH
Dod03g2630 03 57850367 57853037 Dod03g2630 03 57850367 57853037 ECH