Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2624 ATGACGACCACTTCACAAGTCATTACATGCAAAGCTGCAATATGCTGGGAGGCAGGAAAGCCTGTAACGGTAGAAGAGATACAAGTAGATCCACCAAAAGCAACCGAAGCTCGACTTAAGATGCTTTGTGCTAGTATCTGCAGCACAGACATCTCAAGCATTAAAGGATCCCCATATTTTAATCATCCTATAGCACTTGGACACGAAGGAGTTGGTATTGTAGAGAGTGTCGGGGAGCAAGTCACAAATGTGAAAGAAGGGGATGTAGTGATTCCAACATACATAGGAGAGTGCCAAGAATGTGAGAATTGCATTTCAGGGAAATCCAATTTGTGCATGACAAACCCTGTGAGAGTGACAGGTTTGATGCCTGATAACACTTCAAGGATATCCTGCAGAGGCAAGAAGCTGCACCACTCTCTAAGTTGCGCAACATGGTCAGAGTACACAGTCATTGATGCCAACTACATAGTCAAAGTTGATCCAAGCATTAATCCAGCTCATGCCAGCTTCATCTCATGTGGGTTTTCAACTGGTTTTGGAGCCGCATGGAGAGAAGCCAAGGTTGAGAGTGGATCAAGCGTAGCTGTTTTTGGTCTTGGGGCTGTTGGATTGGGGGCTATAAGTGGAGCAAAAATGCTGGGGGCAACCAAGATAATAGGGATTGACAAGAATGAGATGAAGAGAGAAATTGGGGAAGCTTTTGGAATGACGGACTTTATAAATCCGGGTGATAAGTCTCCTTCACAATTGGTGAAGGAACTAAGTGGTGGAATGGGTGTGGATTATTCTTTTGAATGCACTGGAGTTGGCCCTTTACTTACTGAATCCTTAGAAGCCACAAAAATGGGAGCAGGTAAAGCAATAGCAGTTGGTTTAGGAAATGAACCTATTGTGCCGTTGAGTTATGCTGCCATTTTTTTTGGGAGAACTTTGAAAGGTACTATCTTTGGAGGGCTAAAAGCCATATCAGACGTTTCCACAATAGCTGACAAATGCAAGAAGGAGGAATTCCCTCTTCAAGAACTATTCACCCATGAGGTCTCATTGGCAGATATAAACCAAGGTTTTGAGTTATTGGAGCAGCCCAATTGTGTGAAAGTTGTCATCAAGATGTGA 1119 0.4352 MTTTSQVITCKAAICWEAGKPVTVEEIQVDPPKATEARLKMLCASICSTDISSIKGSPYFNHPIALGHEGVGIVESVGEQVTNVKEGDVVIPTYIGECQECENCISGKSNLCMTNPVRVTGLMPDNTSRISCRGKKLHHSLSCATWSEYTVIDANYIVKVDPSINPAHASFISCGFSTGFGAAWREAKVESGSSVAVFGLGAVGLGAISGAKMLGATKIIGIDKNEMKREIGEAFGMTDFINPGDKSPSQLVKELSGGMGVDYSFECTGVGPLLTESLEATKMGAGKAIAVGLGNEPIVPLSYAAIFFGRTLKGTIFGGLKAISDVSTIADKCKKEEFPLQELFTHEVSLADINQGFELLEQPNCVKVVIKM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2624 372 PANTHER ALCOHOL DEHYDROGENASE 5 371 - -
Dod03g2624 372 CDD liver_alcohol_DH_like 8 371 - -
Dod03g2624 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 332 IPR036291 -
Dod03g2624 372 Gene3D - 14 367 - -
Dod03g2624 372 SMART PKS_ER_names_mod 19 370 IPR020843 GO:0016491
Dod03g2624 372 Pfam Zinc-binding dehydrogenase 202 319 IPR013149 -
Dod03g2624 372 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Dod03g2624 372 Gene3D - 179 315 - -
Dod03g2624 372 SUPERFAMILY GroES-like 3 190 IPR011032 -
Dod03g2624 372 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 371 - -
Dod03g2624 372 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2624 Dod-Chr3 57810448 57813564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2624 35 364 Monolignol Biosynthesis Gene Families AT2G21730 26.048 7.51e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2624 K00121 - gmx:100798341 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2624 03 57810448 57813564 Dod03g2624 03 57810448 57813564 ECH