Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2621 ATGATCCAGAACGCTGATATGAGACTCGAGTCGGGGACTTGCAACGTTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTTTCATGGGATCAAAGGCTGAAGAATTTAGTGATGAAAACTGTCGCTTAGGGGAGGCTAATCAGTATACTATGGACGAGGGTGATGGATCTTCTCGTAGGAGCAAGGTTTGTGAAAGATTGAAGCATGCTGTCAGTGAAACCAGCAACATGCCCAGTGTTAATTCCACTCATGATTCTCTGTCTGAAAATGCCAAAAGCACACAAGTCTTGTCTGAGAAGTGTTGGGATTCCAAGTGTTTAGAAGGTCTTGATGACAACATTTCTTGTATCAGTAGAGCCAGTAATGCTGATTTAGTGGGTGGTAGCCATCAAAGAAATGCAGACAGAATAAATATATCTTGTAGTTCACTTCCAGTTAGTCACTTAGGGCCAGAAGGATCTGGAAGTGGACCATCTGTTGACATATCTGGCTTTTCTGAGATTCTATCTCCTAAAGATGCAGATATCCCAGAGAATTTATCGAAATGCTGTGTTGGAAATGTCGATTCATCACCGACCAAAGAGATAGCACCTGTTATTGTTTCTGGTGGAAAATCTCTTGCAGATAAGGATAGTCTTATCAATGGCACTACTGCCAAGCTTTCAGTAAAAATATATCCAAAGTCAGAACCAGATACTGAAAATGACGCTGGAGATGTGAAAGATGAAGGCCCTAAATATTCCGTCCATGATGGAATGCATGAGAAGCTGGGGGAGCTGGTTAAACCACCTGACATTCCTGAAACTCAATCTGAAGATGAGAGTGCTGAATCAGATATTGTTGAGCATGATGTCAAGGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCAATATGTAGTAGGTGCAGCGATGGCGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAGGTTCCTGAAGGGGACTGGCTATGTGAAGAATGCAAATATGCTGAGGAAACTGAAAATCAAAGGCTGGATGTTGAAGGGAAAAAAGTTCATAAAGTTAGTCCAACTTCACAAATCTCTGGCAAAAGGCCTCCTGAAAGCGTGGAAGTGGGTACATCTGCTAAAAAGCAAGCTCTTGAATCAAGCACAGGATCACCAGCATCAAGCCCCAAGAGAATATTTCCACTGTCACGAGAAACTTCATTCAAGAATTTAGATAAAGGAAAGTTGAAGCCTGGTCATCAGATCCCTATTCGTAATCACCCTGGTGGTGATGACATAGAACTTGCTCGTTCTCTTTCCACTGGTCCTCGAAGTCAAACAGCAAAGAGTACATTGTTAAAATCTAATTCGTTCAACAACTTCAATTCCAAACCAAGAGTCAAACTTGTTGACGAAGCTGTCCCCCAAAAGAAGAAAGGGAGTGGCGAACATACTTCTAAGAATATGGAGACACCTGTCCGAATGTTAAGCAAATCAATGTCATTCAAATCCTCGAATTTGGGTCGTTCAAGCGGCACTGAGTCAAAAGTTAAAATGCTTTCTTCTAAGTCTGGAACAACTCAGGATTTGAAAGCATCAAGACTAGCAAAAGAATCAGGTGCATCTGACAGGAAATTTCTGTCTAGGATTGATCGGCCTGGGGTATGTTCAACCATGGCTAGTTCTGTTGTTTCCGCATCCAAGGATGATCAAAAGCTAACACCTCGTGGTGAAACCACTAAAACTCCTGCAGTTAACAACCAAGAGTTTAAGGCCAACCAAGAGAGAACATCTACCAGTGGTGATGAAACTCAACCGGATGGGTTACCTCAGTCACGAGAAACAGCAAATCAGGTCGATATAACCAATGATAGTTCTAGTGATCATGTGAAGTCTGGTGTTAGTACTGCTTCAAAGAGCCCATTCTGTCATAAATGTAAGGATTTTGGCCATCCTACAGAATGCTGCAAGATTGGCAACGTGCAGGAATTTGGTTCTGAAGTATCAGCTGCTGCCCCGATTAGTTCAAAAAAGGAGATGCATAAAGATAATAGATTGAAAGATGCAATTCAGGCAGCTTTACTTAGAAGGCCTGCAATGTACAAGAAGAAAGAAGTACCTGATCAAACTGATGAGTTTCCTACATCAGGCACAGACTTGAATTGTGAAGTCACTTCTCGAGACCAAGTGTTGGTTTCCAACACACCAAAGAATATTGTATCTTCTGGGGAAACCAATGCAAGGCAGGAAACCCTTGGGAATCTTACATTTCAAACTTCATCTTCCAGTGATTTGAAGCAACTTACCTTTTGTCCAACTGATTTTTGTTCACAACCGAGAATGTCAGATTCTGTTGGTCTTGCTTCTGGGAAGCCTGGACTGAGAGACTTTCCTACTCAAGCTTTGGCTGTCTCAAGTGTCCTTTCAAAGATATCAGCATTTCCAGAATATGAATACATCTGGCAAGGTGTCTTTCAAGTGCATAGAAGTGGAAAGCCTCCTGACTTGTATACTGGAATTCAAGCACATTTATCAGCATGTGCTTCCCCTAAGGTTCTTGAGGTAGTGAACAAGTTTCTACCTGAGATTACCCTAAGTGAAGTTTCTCGCATGAGCACATGGCCTTCACAATTTCATCAAGGCAGGGCTAAAGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTATGAGAGACACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCATTTAAAGGAAGTTTTGACGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCTGAAAATTCACAGCGTTGGAATAGGTTGTTTTTCTTGTGGGGTGTATTCAGAGGGCAGAGGATGAATCATTCAGAATCTGCGAAAAATATTTGTATTCCCAGTTTGAATGCAATGCCAATTGAGAAGGATTTTCCAACTGCTGTCATGACATTGTCTGAAACCCTATGTTCACCAACTCGCATGGATGAAGAATCAACTGCTTGCGGTAAAGCATGCAATGCACTTCCTCCATCCACTTCCATGCACCAAGGCCATGCTATGGTAAGTAGGAATCTCGATATCAAAGAAACTATCATTGACCAGACACATTTGGATTCACATGTAAACTTAGAGAGGCAAGATAGTAAAATCAACACCAAATCTGCATCAACCACTCCAACAAGCAGTGCACAATTGTGTCAAGAAATAAATTCCACTGGTTCATCCATGAAAGATGGACAATACAGAGAGTCTAAACCTCCTGAAGGGATGGTACCAAGTGTAAGTAGTAGGATTGTGGAAACAAAAACTGATTATGATATTTCGGTTAAGCCAGAGAACTCCTGGTCTTCAGGGATTCCTTCTGTTGGCAATAATAAGATAGGTATTGCAAGCAATATCAGAGAGAATAAAATTTCAGATAAGACTAACAACGATGATGATCAACGAAGGTCCATAAGGAAACAGATAGAAGATGATCTCAATATTAAGATGGAGGAGACCTTTCAGGAAGACCTGACTGTAAAAGGGGTCAACTTGCAGCGAACTGATTATAAAAAAGTTCAACATATAGATGTTTCAGATACAGTTATGCAGGCTGCCGCAGTTAGTTATCAGAAAATGCCTTGGGGTGAGGTGAATGGCAAATTGGATAATGGAGAAAGTTCCAGCAAGAAGCTGAAGTCAGGTTTCAGAGAAATTTATGGATGTTGCAGTTCAGGAGGCAAGGAATTGTTCAATGGAAGTTTTGATCTCAGTTCCTTTTCTTCAATTGAGGATAAGGGATGCAAAGAAGCTTGTGACGAGAAAATCATCCACGAGGACCTTGGAGCGATGGAAAGAACTTTCTTTCCTGTTGATACATGTCATAAAAATGACTCGCGATTGTTGCTGAATAGCATGTCACTGAAAGGACCTCACGAGTACGAGAACCAGTTTCAAGTCGGGATTCCGAATCTAGAGCTTGCCTTGGGGGGCGAAACAAAACCACCACCGCAAAAGGGTATGTTGCCTTTTTTGGTTGGGGCAGTAGACGAGAAAAACAACCGGGGAAAGCCTCCAGATATATTGGCAGATGAGCAAGAGGATGACAGTGTTGCTGCGTCTCTTTCCCTGTCTCTATCATTCCCATCTTCAAACAAGGAACGTGCCAAACCTGTTCCAAAAGCTGAGCATTTACCCGATGGGCATCATGTGAATACTTCGTTTCTCCTTTTTGGGAGATTCACAGACAAATAA 4239 0.4187 MIQNADMRLESGTCNVCSAPCSSCMHLNRAFMGSKAEEFSDENCRLGEANQYTMDEGDGSSRRSKVCERLKHAVSETSNMPSVNSTHDSLSENAKSTQVLSEKCWDSKCLEGLDDNISCISRASNADLVGGSHQRNADRINISCSSLPVSHLGPEGSGSGPSVDISGFSEILSPKDADIPENLSKCCVGNVDSSPTKEIAPVIVSGGKSLADKDSLINGTTAKLSVKIYPKSEPDTENDAGDVKDEGPKYSVHDGMHEKLGELVKPPDIPETQSEDESAESDIVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAEETENQRLDVEGKKVHKVSPTSQISGKRPPESVEVGTSAKKQALESSTGSPASSPKRIFPLSRETSFKNLDKGKLKPGHQIPIRNHPGGDDIELARSLSTGPRSQTAKSTLLKSNSFNNFNSKPRVKLVDEAVPQKKKGSGEHTSKNMETPVRMLSKSMSFKSSNLGRSSGTESKVKMLSSKSGTTQDLKASRLAKESGASDRKFLSRIDRPGVCSTMASSVVSASKDDQKLTPRGETTKTPAVNNQEFKANQERTSTSGDETQPDGLPQSRETANQVDITNDSSSDHVKSGVSTASKSPFCHKCKDFGHPTECCKIGNVQEFGSEVSAAAPISSKKEMHKDNRLKDAIQAALLRRPAMYKKKEVPDQTDEFPTSGTDLNCEVTSRDQVLVSNTPKNIVSSGETNARQETLGNLTFQTSSSSDLKQLTFCPTDFCSQPRMSDSVGLASGKPGLRDFPTQALAVSSVLSKISAFPEYEYIWQGVFQVHRSGKPPDLYTGIQAHLSACASPKVLEVVNKFLPEITLSEVSRMSTWPSQFHQGRAKEDNIALYFFAKDIESYERHYKGLLDHMIRNDLAFKGSFDGVELLIFPSNQLPENSQRWNRLFFLWGVFRGQRMNHSESAKNICIPSLNAMPIEKDFPTAVMTLSETLCSPTRMDEESTACGKACNALPPSTSMHQGHAMVSRNLDIKETIIDQTHLDSHVNLERQDSKINTKSASTTPTSSAQLCQEINSTGSSMKDGQYRESKPPEGMVPSVSSRIVETKTDYDISVKPENSWSSGIPSVGNNKIGIASNIRENKISDKTNNDDDQRRSIRKQIEDDLNIKMEETFQEDLTVKGVNLQRTDYKKVQHIDVSDTVMQAAAVSYQKMPWGEVNGKLDNGESSSKKLKSGFREIYGCCSSGGKELFNGSFDLSSFSSIEDKGCKEACDEKIIHEDLGAMERTFFPVDTCHKNDSRLLLNSMSLKGPHEYENQFQVGIPNLELALGGETKPPPQKGMLPFLVGAVDEKNNRGKPPDILADEQEDDSVAASLSLSLSFPSSNKERAKPVPKAEHLPDGHHVNTSFLLFGRFTDK* 1413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2621 1412 MobiDBLite consensus disorder prediction 378 394 - -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 1073 1094 - -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 497 542 - -
Dod03g2621 1412 SUPERFAMILY FYVE/PHD zinc finger 280 341 IPR011011 -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 1377 1396 - -
Dod03g2621 1412 ProSiteProfiles Zinc finger PHD-type profile. 288 339 IPR019787 -
Dod03g2621 1412 PANTHER - 7 593 - -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 497 531 - -
Dod03g2621 1412 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 350 IPR013083 -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 230 282 - -
Dod03g2621 1412 PANTHER - 591 1162 - -
Dod03g2621 1412 PANTHER - 1163 1403 - -
Dod03g2621 1412 SMART PHD_3 290 337 IPR001965 -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 350 431 - -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 558 611 - -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 230 272 - -
Dod03g2621 1412 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 591 1162 - -
Dod03g2621 1412 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1163 1403 - -
Dod03g2621 1412 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 593 - -
Dod03g2621 1412 MobiDBLite consensus disorder prediction 575 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2621 Dod-Chr3 57770167 57777902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2621 287 348 C2H2 Transcription Factor Family AT3G01460 33.871 2.79e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2621 - - gmx:100784908 1861.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2621 03 57770167 57777902 Dod02g1276 02 15449491 15458480 ECH
Dod03g2621 03 57770167 57777902 Dod03g2621 03 57770167 57777902 ECH