Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2616 ATGGCACCTTCTCATCCGATCGTAGCTGATTCGATAGCTCCATCGACACAACCCGAAACCCTCGACAATGATCTTCAGCCATTCTTTATTCTCCACAAAGCTTCGTCCCGGCGAAAAGATAGATCATCAACAGGACAGGGTAAATTGCGAAAGAGAAATGAGTTGTCTTCACTGCGAAGTGCAAAGAAACAGGTAGGAGATATGAACGAGGAATGTGATCGCCATTTGTTTCAGCAACAACAAATTGAAGCCTTTCACAGTGTTTGGACAAAAATTGAGTCTACCATTAAGGACGTTTTGCATGATCTTAATGCTAGTGTATTTAATGGTATACAACAGTGGGTTCTAGAGTGCTTCAATGCTACTAGATTGCATGGAGAACCTAGTTCGGCTGAAGCAATTCGATCTTTTCCTGTTCTGAATAACACTACTCCTGGGCAGCTGTTCACTGCATTGGTTGTTACCAGAAATATAGAGTTTGTTGACGATATAGTGACCTTTCAAGAGCTTGGCCATTGCTTGAAATCCCACGGATGCCATGTGGCTATGCTTTCATCGGTGGATGTTTCCATGAAAAATGGGATTGCAGGTTGCTTGAAAGCTTTATTAAGAGAGTATCTAGTGGGTGCAACTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGAGAACTACAATAAACCACTAGTGCTAATCATTAATGACTTGGAAAGATGCTGTGGATCTGTCTTGACGGATTTCATCCTGATGTTGAGTGAATGGGTTGTCAAGGTGCCAATTATCTTAATAATTGGAGTTGCGACGACAGTGGATGCCCCAAGAAATGTTCTGCCATCCCGTGCTCTTGAGCGTTTATGTTTCTCTAAGTTTATGCTTGGAACGCCGGTTGAAAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAAAATTGCACTACGTTTAATATTGGTCATAAAGTGGCACTCTTTCTGAGAAACTACTTCACAAACCAGGATGGGACATTAACATCTTTCACAAGAGCTTTAAAGGTAGCATGCCTATTACATTTATCGATGGAACCTCTGAGTCTCATACATGGGCGAACACTGGCTGAAGACCAAAATGAGGGGCAATCTACATTATCGCCTGAGATCATGTTGAAATACATGGATGAACTTCCATCATATGCAAGGAATCACAAAGTTGATCAGACTGGAAAGAGCATGGCTCAGGGTTTGTCAGATTTGGTGACAGTGCAGAAGCTATGGAGCACCGCAGTTCTTTGCCTATTTGAAGCTGGAAAATATAGCAGGGTGAGACTGCTGGATTTGTTTTGTGAAGTGCTCAATCCTGATTTGTACTCACAAAAGGATACCGTTTGTTATGCGGGGAATGAAAAGGATACTGTTTGTTATGCGGGGAATGAAAAGGATCATGTGTCGTCCTCAGCAAATGATTCCATCGAGAAAAGTGATGGTTTGATTAACCAGATAGTACACAAAGTGAGGGATCTCCCTACAGGAATGCTTTGTCAGTTATTTGAGAGCTGGGAAAAGCTTACTGCCGATATTTCAGAGATTCATGATAAATTGAAAATGTTTCAATCTTCAGCAAGATATGAAGATGGAAAGAGTTCGCGCAAGAGTTCCAAGGACATTTCAAAGAGACATGCGTCCAAGGTTTCATTAAATATTAACAATGAGTCAAGAGTGTTAAACTTGCAAGCTGTCTCATTTATAGATTGCTTAATTAGAAATTATATGAGGCCCATTGAGTGCATGCCTTTTCATGAAATTTTCTGCTTCAAGAATGTCGAGAAGCTTCAATCGATTTCTATTTATATAAACTGCAAGCCGGCAAATAATAAGATTGTTCTTCATACATTTTATTATTACATATGGGGTTTGTATAATACAACTGAGGTTTTGATTGGAGATTCAAGAACAAGGATTCAAGTTGATCTGTTGGATTCCCATAAAATTTTAAGGTGCAGTTGCTGTAACAAAACTGGCAATGCCGTATTGCCATCAAGACATGATTCCTCAATTATGTATTACCTGGCTCAAGAGCATGGAGATCTGATCAATCTTCATGACTGGTTCCAATCTTTTAGAACAATTATTCTTCAGCAAACAAATAAACGGAAGCAAAAGTCGAAGCAGTCCCCCCAACCAAAGAAGAGAAAGGATACAGTAGTATCCGGAGAACAAAACGAAGTATCAATACAAGCACGCTTTTGCAGAGCAGTTACAGAAATGCAGATCACTGGGCTTGTTAGAATGCCCAGCAAGAGGCGCCCAGATTTTGTACAAAGAGTAGCATTTGGACTCTGA 2325 0.403 MAPSHPIVADSIAPSTQPETLDNDLQPFFILHKASSRRKDRSSTGQGKLRKRNELSSLRSAKKQVGDMNEECDRHLFQQQQIEAFHSVWTKIESTIKDVLHDLNASVFNGIQQWVLECFNATRLHGEPSSAEAIRSFPVLNNTTPGQLFTALVVTRNIEFVDDIVTFQELGHCLKSHGCHVAMLSSVDVSMKNGIAGCLKALLREYLVGATDSADISILASWYREQENYNKPLVLIINDLERCCGSVLTDFILMLSEWVVKVPIILIIGVATTVDAPRNVLPSRALERLCFSKFMLGTPVERMDAIVEAVLVKNCTTFNIGHKVALFLRNYFTNQDGTLTSFTRALKVACLLHLSMEPLSLIHGRTLAEDQNEGQSTLSPEIMLKYMDELPSYARNHKVDQTGKSMAQGLSDLVTVQKLWSTAVLCLFEAGKYSRVRLLDLFCEVLNPDLYSQKDTVCYAGNEKDTVCYAGNEKDHVSSSANDSIEKSDGLINQIVHKVRDLPTGMLCQLFESWEKLTADISEIHDKLKMFQSSARYEDGKSSRKSSKDISKRHASKVSLNINNESRVLNLQAVSFIDCLIRNYMRPIECMPFHEIFCFKNVEKLQSISIYINCKPANNKIVLHTFYYYIWGLYNTTEVLIGDSRTRIQVDLLDSHKILRCSCCNKTGNAVLPSRHDSSIMYYLAQEHGDLINLHDWFQSFRTIILQQTNKRKQKSKQSPQPKKRKDTVVSGEQNEVSIQARFCRAVTEMQITGLVRMPSKRRPDFVQRVAFGL* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2616 774 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 19 773 - -
Dod03g2616 774 MobiDBLite consensus disorder prediction 35 64 - -
Dod03g2616 774 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 227 361 IPR045667 -
Dod03g2616 774 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 69 205 IPR045667 -
Dod03g2616 774 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g2616 774 Pfam Origin recognition complex winged helix C-terminal 645 772 IPR040855 -
Dod03g2616 774 MobiDBLite consensus disorder prediction 709 733 - -
Dod03g2616 774 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 19 773 IPR020795 GO:0003677|GO:0005664|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2616 1 708 Core DNA Replication Machinery Family AT5G16690 43.994 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2616 K02605 - gmx:100780646 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2616 03 57694760 57704098 Dod03g2616 03 57694760 57704098 ECH