Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2585 ATGACTTGGGAGGACAGAGGCAAACTCCTTCCTCATCTCCTTAGTGCATGTGCTAAGTATATTGAATCAGGCAGCATCATAAATGCAGACATAGGATTGGCCCGCATTTCTCATCTTGCCTCCCCAGACGGTGATTCAATGCAGCGGGTAGCCACCTATTTCAGTGAAGCATTATCTTACCAAGTTATCAATAAAAACTTCCGTGGTGCACATGATCTTCTGTCAAAACCATTCTCAACTTCAGAAGAACTCCTAGTTAAGAAGCTATTCCTTGAACTGTATCCATTTCTAAGGATAGCATACGCAACCATAAATCAAACCATTATTGAAGTCATGAAAGGGGCACGATCCATTCACATCCTTGATCTTAGTGCTTCTCATGATGCTACTCAATGGTCTCTCCTTATGCAAAGTTTAAAGGAGCATTCAGTTATGCCACCATATTTGAAGATTACATGCGTACACCCTAAGGAGGAGGTGTTAGAACAATTAGGTTTGCACTTGAGAGTGGAAGCTGAAAAGCTAAGGTTCCCATTTGAATTCCATGCTATTGTGAGCACCTTGGAGAATTTGGACCTTGAAAAGCTGCCTATACAAAAAGGAGAGCCTCTTGCAATTAGCATTGTGCTTCAATTGCACTCTCTTTTGGCCAATGATGATCCAATTCCAGTGGTCAACCCACATTCAGGAACATCAATGCATCAACGAACTTTTGAAGAGATCCTTGGGAGACAACAAATGAATAGTATTAGTCCCGATTCATCATTGTCACCTCCTTCTCTATGCCCTTCACCTAAGATAGAATGCTTTCTATATGGCTTGTGGAAGCTCCAACCTAAAGTGGTGGTGATCACTGAGCAAGAATCAAACGTTAATGGGCCTACTCTGACTGATAGGGTTGACAAAGCATTGAATTTTTATGCTTCACTGTTTGATTGCTTGGAATCTACCTTTTCAAGGACAATGGTGGAGAGAGCCCTATTGGAGAGGATGGTGCTTGGGGAGCAAATAAGGAACATTGTTGCATGTGAGGGGTCTCAAAGGAAAGAGAGGCATGAGAAGCTTAAGAATTGGATCCCAAGGCTCACATTGGCTGGATTTGCAGGTGTACCTATAAGTTCTGATGGGATGTTCCATGCCACAAAGCAATTGCAAAACTATGGACATGGATACAAGATCCTTCGAGAGGATAAATGCTTGTTTATCTGTTGGAATGATAACCGTCTATTTTCTATATCAGCATGGAGGTTTTAG 1254 0.4195 MTWEDRGKLLPHLLSACAKYIESGSIINADIGLARISHLASPDGDSMQRVATYFSEALSYQVINKNFRGAHDLLSKPFSTSEELLVKKLFLELYPFLRIAYATINQTIIEVMKGARSIHILDLSASHDATQWSLLMQSLKEHSVMPPYLKITCVHPKEEVLEQLGLHLRVEAEKLRFPFEFHAIVSTLENLDLEKLPIQKGEPLAISIVLQLHSLLANDDPIPVVNPHSGTSMHQRTFEEILGRQQMNSISPDSSLSPPSLCPSPKIECFLYGLWKLQPKVVVITEQESNVNGPTLTDRVDKALNFYASLFDCLESTFSRTMVERALLERMVLGEQIRNIVACEGSQRKERHEKLKNWIPRLTLAGFAGVPISSDGMFHATKQLQNYGHGYKILREDKCLFICWNDNRLFSISAWRF* 418
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2585 417 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 416 IPR005202 -
Dod03g2585 417 ProSiteProfiles GRAS family profile. 1 416 IPR005202 -
Dod03g2585 417 Pfam GRAS domain family 12 416 IPR005202 -
Dod03g2585 417 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 416 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod03g2585 Dod-Chr3 57516212 57517465 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2585 4 416 GRAS Transcription Factor Family AT1G50420 43.448 6.14e-118 350
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g2585 GRAS 2.5e-102 CL0063
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2585 - - ahf:112772597 454.907