Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2583 ATGGACTCAGGTTCACCATACCAATGGATCAAGGAGCTGAGATGGGAGGACAGCAGTAACATAAATCCATTCAGCCTTCTTCTTGAATGTGCTAAATTTGTTGCATGTGGCAGCATAAAAAATGCAGACATTGGACTTGAGTATATCTCTCATCTTTTATCTCCTGATGGTGCTGCAGCACAGCGAACCGTCACTTATTTCAGCGAAGCACTTGCTTTCAGGATAGTGAAAAATCTTCCTGGTGTATACAAAGCTCTCAATTCCTCAAAACCATCATCTACTTCTGAGGAAATCCTTGTTCAAAACTATTTCTATGAATTGTTTCCCTTCTTGAAGTGTGCGTACTTGACCACAAATCAGGTAATTGTTGAAGCCATGAAAGGTGAAAAAATGGTTCACATAATTGATCTTCATTGTTCTGAGCCAGCTCAATGGATAGACCTTTTACTGACTTTGAGTAAGCGTCAAGAAGGTCAACCCCATCTGAAGATCACAGGCATTCATGAGAAGAAGGAGGTTCTAGACCAAATGAGTTCTAGCCTCATCAGTGAAGCTGAGAAATTGGATTTTCCTTTACAATTCAATCCTGTTGTTAGCACATTGGAAGATCTTGACATTGAAAGCTTGCCTGTCCGGGCAGGTGAAGCTCTTGCCATCAGTTCAGTCCTCCGATTGCATCGACTTCTCGCGACTGATGATGAAATGGTTGGGAGGAACTCGCCCGCAGTATCTATGAATCTGCAGAGAGCAGTGCACATGAACCGAAGGACTTTCGCAGAGTGGCTTGAGAGAGATATGATCAATGCATGTATCTCAAGTCCTGATTCTGCATTATCACCTCTTCCTTTATATCCTTCACCTAAGATGGAGGCCTTTCTGAATGATCTGCGCAAGCTCCAACCGAAACTGGTGGTGATCACTGAACAAGAATCAGATGTTAATGGATGTAACTTAATGGAGAGGGTTGAAAAAGCATTGCACTTCTATAGTACATTGTTTGATTGCTTGCACTCTACTGTTATAAGAACATCTCTAGAGAGGAAAAAACTTGAGAGTATGCTTCTTGGAGAGCAGATAAAGAACATTGTAGCATGTGAGGGAGTTGACAGAAAGGAGAGGTATGAGAAACTTGGGAACTGGATTCGAAGGCTTGACATGGCAGGTTTTGTGAGGGTACCCTTGAGCAACAATGGGGAGCTGCATGCAAAGATGGTGCTGCACAGCTATGGGCACAGATATACCATTCGAGAAGAACATGATTGTCTACTTGTCTGCTGGGCCGATAGGCCCCTTTTCTCCATATCAGCCTGGAGTTTTAGGAGATGA 1326 0.4306 MDSGSPYQWIKELRWEDSSNINPFSLLLECAKFVACGSIKNADIGLEYISHLLSPDGAAAQRTVTYFSEALAFRIVKNLPGVYKALNSSKPSSTSEEILVQNYFYELFPFLKCAYLTTNQVIVEAMKGEKMVHIIDLHCSEPAQWIDLLLTLSKRQEGQPHLKITGIHEKKEVLDQMSSSLISEAEKLDFPLQFNPVVSTLEDLDIESLPVRAGEALAISSVLRLHRLLATDDEMVGRNSPAVSMNLQRAVHMNRRTFAEWLERDMINACISSPDSALSPLPLYPSPKMEAFLNDLRKLQPKLVVITEQESDVNGCNLMERVEKALHFYSTLFDCLHSTVIRTSLERKKLESMLLGEQIKNIVACEGVDRKERYEKLGNWIRRLDMAGFVRVPLSNNGELHAKMVLHSYGHRYTIREEHDCLLVCWADRPLFSISAWSFRR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2583 441 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 439 - -
Dod03g2583 441 ProSiteProfiles GRAS family profile. 14 438 IPR005202 -
Dod03g2583 441 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 439 IPR005202 -
Dod03g2583 441 Pfam GRAS domain family 25 437 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2583 Dod-Chr3 57495958 57497486 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2583 1 441 GRAS Transcription Factor Family AT1G50420 50.885 1.08e-150 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g2583 GRAS 5e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2583 - - gmx:100779726 644.425