Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2579 ATGGCCATGAAGAAGAGCTGGTTCAACCTTGTGAAGAGGCTCTTTATATGGGACTCACATTCCACCACACAAGAGAAGAAGAAGGAGAAGAGAAGGAAATGGGTATTTGGAAGGATAAAGACCAAGAGATTGCCTTCACTTCAAGCCCCACCACCACCACCTTCAAAAGAAACAACAAAACTGAGTGAAGCAGAGGAAGAGCATAGCAAGCATGCTTTGACAGTGGCTATTGCCTCAGCTGCTGCTCAGGTTGTTTTGATCACTGGGGTCCCACAACAACCAGAAGAAAATCAAACTGCAAAAGCCAGGAATGGTGGTGATCCTCAATACACATACCAGTGCGAGAGGAACATCAAAGAATCTGCAGCCATCAAAATTCAAACTGCCTTTCGGGGTTACCTAGCTAGGAAGGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATAATTCGTGGCAGAGCAGTAAGGCGCCAAGCTATGAGTACCTTGAAGCGCTTGCAGTCCATTGTGAGTATCCAGTCACAGGTCTGTGCTAGGAGGCTCAAAATGGCTGAAGGCGAATGGGATTGCACTGATAATGAAGAGATGCAAAATTCCAAAGACAAGATAATAAGGATGGACTCAAACAGTGAAAGAAAGTGGGATGAAGGCACCTTGTTGAAGGAAGAGGTACATGCCTCTGGTATTAGCAAGAAGGAAGCTGTTCTTGAGAGAGAAAGAATAAAATACTCATTCAATCATAGAAGGTCAGCAGAATCAGAAAGAAGCAAAGTGAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTGGACACACAACTTTCTAAAAGTAAAGAGCTTGAAGATTTAGACTCAGTTTTCCGCTCACTTTCTAGAGGTGGTGGTGAGGAACATGGATTAAGACAACTTAAGCTGACAAATATGCACAATAGACAAAGTGCAGTTGAAGGGTTAGATTCTCCAATACTTGTTTCAAGAAAAACTTTCCCTCATAGGAGGCAGTGTTCTGTTGGGGAAGACCACTCATTTTCAAGCTCTCCTGTGACTCCAGCATACATGGCTGCAACAGAATCAGCAAAAGCAAAAGCAAGGTCAACAAGCTCCCCAAGAGTAAGGACAGGGAATTTGGACTCTGATAGTTATTCACCATGCAAGAAAAAGCTATCTTTTGTGTCTTCCTATAACAGTGAAGTTCTTAGTAGTGGTAGAAATGGCAAGTTCAGTGGTGGTGTTCAGCAAAGGTCTCCAAGCTTTAAGGGAATTTCAGTGCCTATAAAATCAAGAGGGACTATAAAGGATCTCAGCATTAATTCAGACTGCTCACTTCCCAGTTGGGATAGACACAGTTCCTTCAAATAA 1365 0.433 MAMKKSWFNLVKRLFIWDSHSTTQEKKKEKRRKWVFGRIKTKRLPSLQAPPPPPSKETTKLSEAEEEHSKHALTVAIASAAAQVVLITGVPQQPEENQTAKARNGGDPQYTYQCERNIKESAAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKRLQSIVSIQSQVCARRLKMAEGEWDCTDNEEMQNSKDKIIRMDSNSERKWDEGTLLKEEVHASGISKKEAVLERERIKYSFNHRRSAESERSKVNGRWRYWMEQWVDTQLSKSKELEDLDSVFRSLSRGGGEEHGLRQLKLTNMHNRQSAVEGLDSPILVSRKTFPHRRQCSVGEDHSFSSSPVTPAYMAATESAKAKARSTSSPRVRTGNLDSDSYSPCKKKLSFVSSYNSEVLSSGRNGKFSGGVQQRSPSFKGISVPIKSRGTIKDLSINSDCSLPSWDRHSSFK* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2579 454 PANTHER IQ-DOMAIN 11 4 440 - -
Dod03g2579 454 Pfam IQ calmodulin-binding motif 121 140 IPR000048 GO:0005515
Dod03g2579 454 MobiDBLite consensus disorder prediction 362 381 - -
Dod03g2579 454 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Dod03g2579 454 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Dod03g2579 454 MobiDBLite consensus disorder prediction 361 381 - -
Dod03g2579 454 MobiDBLite consensus disorder prediction 404 422 - -
Dod03g2579 454 Gene3D - 117 169 - -
Dod03g2579 454 SMART iq_5 118 140 IPR000048 GO:0005515
Dod03g2579 454 MobiDBLite consensus disorder prediction 404 424 - -
Dod03g2579 454 PANTHER IQ-DOMAIN 5-RELATED 4 440 - -
Dod03g2579 454 Pfam Protein of unknown function (DUF4005) 342 405 IPR025064 -
Dod03g2579 454 MobiDBLite consensus disorder prediction 42 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2579 Dod-Chr3 57459710 57463231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2579 1 454 IQD Protein Family AT5G13460 45.378 6.38e-107 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2579 - - gmx:100800192 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2579 03 57459710 57463231 Dod03g2579 03 57459710 57463231 ECH