Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2576 ATGGAGAAGTACCTGAGAAACAATTTTAACGTGCAGCCGAAGCGATCCTCCCAGGACGCCCTCCGGCGATGGAGATCCGCCGTCTCCGTCGTGAAGAACCCCCGCCGCCGCTTCCGCATGGTCGCCAATCTCGCCCAACGCGCCGAAGCCGAAAAAAAACGCAAGAACCTTCAGGAAAAGGTTCGGGTGGCTCTCTATGTGCAAAAAGCAGCGTTGCAATTCATAACTGCTGGGAGCCGCAGTAGTGGTAGTGGTGATTACATGCTCTCCAAAGAAGTTCAAGGAGCAGGTTTTGGAATTGAGCCAGATGAATTAGCATCCATTGTTCGAACCCATGACACCAAATCCTTAGAACGTAATGAAGGAGTTGAAGGGTTAGCAAGACATGTTGGCGTGTCATTGCAAGAGGGTGTCCATTCAAGTGATGTTCCACACAGACGAAAAATCTATGGTTGTAACCGCCTTGCGGAGAAGCGCTCCAGAAGTTTCTGGATGTTTGTTTGGGATGCAATGCAGGACTTAACTTTGATGATCCTTATGGTGTGTGCTGTGGTTTCGGTTGGTGTTGGAATCTCAACTGAAGGTTGGCCAAAAGGTATGTATGATGGAGTGGGAATCATACTCTGTATTCTGTTAGTGGTATTTGTCACTTCAATCAGTGACTATAAACAGTCCTTGCAATTCAAGGATTTGGATAAAGAGAAGAAAAATGTCACCATCCAAGTTACAAGAGATGGTAGAAGACGGAAGGTTTCAATTCATGATCTAGTGGTGGGAGATATAGTGCATCTCTCAATTGGAGACATAGTTCCTGCAGATGGGATGTTCATATCAGGTTTTAGCCTGTTGATCGATGAATCAAGCCTATCTGGCGAGAGTGAGGCTGTGAATGTTGACCAACAGAAGCCTTTTCTTCTATCAGGGACAACAGTGCAAGATGGTTCTGCAAAGATGCTAGTGACTTCTGTTGGTATGAGGACAGAATGGGGAAGATTGATGGATACTTTGAACGAAGGAGGGGACGATGAGACACCCCTTCAGGTCAAGCTGAATGGGGTTGCCACCATTATTGGAAAGATAGGAGTGGGTTTTGCACTCCTAACATTCCTGGTTCTAACTGGCAGGTTCTTGATGGAGAAAGTGTCTCGTCATGAGATGAAAGAGTGGTCTCTGAATGATGCATCTAAGCTTCTCAATTTCTTTGCAACTGCGGTGATTATTATAGTTGTGGCAGTTCCTGAGGGGCTTCCTTTGGCAGTGACACTGAGTCTTGCATTCGCAATGAAGAAACTAATGAATGATAAGGCACTTGTTAGGCACCTTTCTGCATGCGAGACTATGGGTTCTGCTGGTTGTATTTGCACGGATAAGACAGGAACTTTGACAACAAATCACATGGTTGTGGAGAAAATATGGATTTGCGAACAAACAAAGGCAATAAAAAGCAGTGACAGAGAAAATGTGTTGAAGAACTTGGTCTCTGAAGAGATATGTGATCTCTTTCTGCAGTCCATATTCCAGAATACAAGCTCAGAAGTGGTCAAAGGGGAAGATGGAAAGAACAAGGTTATGGGAACTCCCACAGAGACCGCATTGCTGGAGTTTGGCTTGCTTTTGACTGGTGATTCTAAGTCTTATAATGAGAAGTATAAGATAATGAAGGTTGAACCCTTCAATTCTGTCAAAAAAAAGATGTCAGTGCTCGTGGCTCTTCCCGATGGCAAAAACAAGTCTCGAGCATTTTGCAAAGGAGCATCAGAAATAGTTCTGAAGATTTGTGACAAAGTTGCTGATGCAAATGGCAAAGTCGTCCATTTGAAGGAAGAGCAAAGAAAGAGCATCACAGAAGTAATAGATGGTTTTGCTTCTGAGGCTCTAAGAACACTCTGCATTGCCTTCAATGATGTTGAAGGATCCTCTAAAGGTGATAGTATTCCTGAGGATAATTACACGTTGATAGCTATTATTGGGATCAAGGATCCAGTGAGGCCTGGAGTGAAAGAAGCAGTTCAGACATGTTTAGCAGCTGGGATAACTGTTAGGATGGTAACTGGTGACAACATAAATACTGCTAAAGCAATAGCTAGAGAATGTGGCATCTTGACAGATGGATTGGCTATTGAGGGACCAGAATTCCGGAATAAGAGCCAACAAGAGATGGAGGAGATCATACCAAAATTGCAGGTAATGGCTCGGTCCTTGCCTCTTGACAAGCACACCTTAGTAACCCATTTGAGGAATGATTTTAATGAAGTTGTGGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTAGCTATGGGTATTGCAGGGACAGAGGTTGCAAAAGAGAATGCGGATGTGATTGTAATGGATGACAACTTCACAACCATAGTGAATGTTGCCAAATGGGGCCGTTCTGTGTATATAAATATACAAAAGTTCGTGCAGTTCCAATTAACGGTTAACGTTGTAGCTCTCATGTTAAATTTTGTTGCAGCATGCGTGTCAGGCTCTGCTCCTCTCACTGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACACTTGGTGCTTTGGCACTTGCCACGGAACCTCCCCATGATGGCCTAATGAAGAGGCCACCTATTGGAAAGACTGCTAAATTCATCACAAGGGTCATGTGGAGGAACATAATTGGTCAGAGCATATATCAAACTATTGTCCTTTTGGTTCTCGAATTTCGTGGGAAGCAGATTCTCAAGCTCGATGGACCTGATGCTACCACTGCTCTGAATACAGTCATATTCAACGCCTTTGTGTTTTGCCAGGTATTCAATGAGATAAATAGCCGTGACATGGAGAAGATCAATGTTCTGCGAGGCATGTCCAGCAGCTGGGTTTTCCTAGTGGTCATAGCCTCAACAATATGCTTTCAAATCATAATAGTTGAATATTTGGGCACATTTGCTCAAACAGTGCCACTGAGCAAGGAACTGTGGTTAACCAGCGTGCTGATTGGTGCAGTAGGTTTACTGGTAGCTGTTGTCCTAAAATGCATTCCTGTTCCCACAACTTATTACGTTCCTACGCCTCATGATGGTTACGAGCAGCTTCCCAGTGGACCAGAGTTGGCATGA 3123 0.4432 MEKYLRNNFNVQPKRSSQDALRRWRSAVSVVKNPRRRFRMVANLAQRAEAEKKRKNLQEKVRVALYVQKAALQFITAGSRSSGSGDYMLSKEVQGAGFGIEPDELASIVRTHDTKSLERNEGVEGLARHVGVSLQEGVHSSDVPHRRKIYGCNRLAEKRSRSFWMFVWDAMQDLTLMILMVCAVVSVGVGISTEGWPKGMYDGVGIILCILLVVFVTSISDYKQSLQFKDLDKEKKNVTIQVTRDGRRRKVSIHDLVVGDIVHLSIGDIVPADGMFISGFSLLIDESSLSGESEAVNVDQQKPFLLSGTTVQDGSAKMLVTSVGMRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGVGFALLTFLVLTGRFLMEKVSRHEMKEWSLNDASKLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVEKIWICEQTKAIKSSDRENVLKNLVSEEICDLFLQSIFQNTSSEVVKGEDGKNKVMGTPTETALLEFGLLLTGDSKSYNEKYKIMKVEPFNSVKKKMSVLVALPDGKNKSRAFCKGASEIVLKICDKVADANGKVVHLKEEQRKSITEVIDGFASEALRTLCIAFNDVEGSSKGDSIPEDNYTLIAIIGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTAKAIARECGILTDGLAIEGPEFRNKSQQEMEEIIPKLQVMARSLPLDKHTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFTTIVNVAKWGRSVYINIQKFVQFQLTVNVVALMLNFVAACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGKTAKFITRVMWRNIIGQSIYQTIVLLVLEFRGKQILKLDGPDATTALNTVIFNAFVFCQVFNEINSRDMEKINVLRGMSSSWVFLVVIASTICFQIIIVEYLGTFAQTVPLSKELWLTSVLIGAVGLLVAVVLKCIPVPTTYYVPTPHDGYEQLPSGPELA* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2576 1040 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 49 IPR024750 GO:0005516
Dod03g2576 1040 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Dod03g2576 1040 Pfam E1-E2 ATPase 239 432 - -
Dod03g2576 1040 SMART Cation_ATPase_N_a_2 117 191 IPR004014 -
Dod03g2576 1040 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 666 IPR023299 GO:0000166
Dod03g2576 1040 Coils Coil 40 60 - -
Dod03g2576 1040 CDD P-type_ATPase_Ca_PMCA-like 145 889 - -
Dod03g2576 1040 SUPERFAMILY Calcium ATPase, transmembrane domain M 121 1017 IPR023298 -
Dod03g2576 1040 Pfam haloacid dehalogenase-like hydrolase 452 770 - -
Dod03g2576 1040 SFLD Haloacid Dehalogenase 436 808 - -
Dod03g2576 1040 Gene3D - 464 661 IPR023299 GO:0000166
Dod03g2576 1040 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1024 - -
Dod03g2576 1040 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Dod03g2576 1040 Gene3D - 16 76 - -
Dod03g2576 1040 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 113 1017 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dod03g2576 1040 SUPERFAMILY HAD-like 453 861 IPR036412 -
Dod03g2576 1040 Gene3D - 451 801 IPR023214 -
Dod03g2576 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 551 702 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g2576 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 392 480 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g2576 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 721 844 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g2576 1040 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g2576 1040 PRINTS H+-transporting ATPase (proton pump) signature 614 632 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g2576 1040 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g2576 1040 Gene3D - 137 337 - -
Dod03g2576 1040 SFLD p-type atpase 436 808 IPR044492 -
Dod03g2576 1040 PANTHER CATION TRANSPORTING ATPASE 3 1024 - -
Dod03g2576 1040 Pfam Cation transporting ATPase, C-terminus 841 1014 IPR006068 -
Dod03g2576 1040 Gene3D - 169 1015 - -
Dod03g2576 1040 SUPERFAMILY Calcium ATPase, transduction domain A 238 335 IPR008250 -
Dod03g2576 1040 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Dod03g2576 1040 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Dod03g2576 1040 PRINTS P-type cation-transporting ATPase superfamily signature 676 686 - -
Dod03g2576 1040 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Dod03g2576 1040 PRINTS P-type cation-transporting ATPase superfamily signature 654 665 - -
Dod03g2576 1040 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2576 Dod-Chr3 57414976 57430203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2576 57 1037 Primary Pumps ATPases AT3G57330 70.468 0.0 1412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2576 K01537 - gmx:100805063 1697.18