Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2567 ATGGTTGATATGCTTGGCTCATTCATCTCTGCCTTCCTGCAAGTGCTGCTGGATAGGATAGCTCGACCTGAGCTTATTGACTTCTTCCGTGGCAACCATCTTGATGAGGCACTTCTGGAGAAGTTGAAGATGCTCTTGCTGTCAGTCACTACAGTGCTCACTGATGCTGAGGAGAAGCAGTTTATTGATCCATTGGTGAAGGAATGGGTTGATAGGCTTAAAAATGCTGCTTATGATGCTGACGATATCCTGGATGAGATAGCCACTAAAGCATTGGTAGACAAGATGGATTCTGGGTTTCACACCACCTTAGATAAGGTAAGAGATTATGCTTCTTCTCTCAATCCTTTTGTTGAAAGAGTTAAATCAAAAGTTGAAAGGATAGTTGAGAGACTGAAATCTATTATAGAGCATAAAGATCTTCTTGGTCTTAAGGAAGGTGGTATGGGTAGATCACTCTTATTAGCTTCAGCCACAACTTCTTTGGTGGATGAACACCGAGTGTATGGCAGAAATGATGATAGGGAGAAGATTATTGATTTTCTGCTATCAGGAGAGTCAAATGGAGAAGGGGTGCCTGTGGTTGCAATTGTTGGGATGGGAGGGATAGGAAAGACCACTCTTGCTCAGATTTTGTACAATGACACGAGGGTGAGGAACCATTTTCAATTAAGATCATGGACCTCTATTTCAGAGACATCAGATGTGCGCGACATATCCAAGAAAGTTTTTGAGTCGTTCAATTTGTGGTATTCTAACATCACAGATTTGAATGTACTTCAAATCAAGCTTCAAGAAAAATTGGCAAGACAAAGATTTCTGCTTGTCTTGGATGGGTTTTGGAATGAAAACTATCTTGACTGGGATATTTTCCAGAGGCCTTTTCTATCGGGAAGTTGGGGAAGTAGAATTATTGTCACCACACGTAGTCAAAGTGTTGCATTGGCAATTCGAGCTGATCAAACTCATTCCCTCTCGCTTCTTTTTCATGAAGATACTTGGAAGTTATTCTCAAGTCATGCATTCAAATCTGGGAACCCAGATGAGTATCCTGCCTTAGCACAAATTGGCCAGAAAATAGTGAAAAAGTGCAATGGTCTCCCTCTTGCTGCGAAAACACTAGGGAGTCTTGTACGTTGTAAAGAGGATATTGAGGAATGGGAAAATATATACAACAGTAAGATATGGGAGCTACCAAGTGATAAGAGTAGCATACTTCCTGCTTTAAGATTAAGCTACAGTCACCTACCTTCACAGTTAAAGCGATGTTTTAGTTATTGTTCCATATTTCCTAAAGGCTTTGAAATCAAGAAGTGGGAATTGATCTATTTATGGATGGCTGAAGGTATCCTGCCACAGCTAGAACCAGAGAAGCGAATGGAAGATACAGGCGATGAATGCTTTCAGGAGTTATTGTCTAGGTCATTCTTTCATCAGTCAGCTCACCACAAATCACACTTCATGATGCATGACCTTATCAATGACTTAGCACAATGTGTTGCAGGAGATTTTTGTTACAAGCTAGAGGATAATAATCCAAGCAAAACTGCAACCTGGATTCGTCATTTGTCATATTTTCAAGGCATATATGATGCCCCTGAAAAATTTGAGTCCTTCTCTGAATTCCAACAACTGAGGACTTTCCTACCGTTCAAATTCTCACCCTTCGGCAGCACATCTTCAATTACTAGTATGGTTTCAATTCTGTTACCGAAATTGAGGCGCTTGCGTGTGCTATCTCTGTCCTATTATCCAATTACCAAGTTGCCAAATTCAATTGGAGACTTGATACATCTACGGTACTTGGATCTTGCTTACACTACAACTGAGCATTTGCCTGATTCTGTCAGCACTTTGTATAACTTAGAGACGCTAATTTTGTCGGGTTGCCACAGTCTCCGCAAGTTACCACAAAACATGTTCAGACTTGTCAATTTACGCCATCTTGATATTAGTGGAAGCGGTGTAATTGAGATGCCAGCAAAGTTGGGTAGACTAAAATCTCTTCAATTGTTAACTAATTTTGTTGTTAGCAGTGGCGGGGGATCCAAAATTAGTGAGTTAGGGGAGCTTTCAGAACTTCATGGAGCACTTTTGATTGTGAACCTGCAGGATGTGGCTGATGCAACAGAAGCTTCCAATGCTAGGCTGAGTAGCAAGAAATATCTTCATAAGTTGGAATTCAAATGGACAACTACAACTCATAATGTGCACAGGGAAGCCAATGTACTCAATATGCTAAAGCCTCATCAAAATGTGAAAAGGCTTAAAGTTCAAAATTTTGGTGGTAATGGGTTGCCAAATTGGCTGGGCAGCTCTGCATTGTCTAGTATGGTGTTTCTACATCTTGCGGAGTGTGACAGTTGCTTGTCCTTGCCATCACTTGGACAACTGCCCTCCCTTAGGGAACTCCATATAGCAAGTATGAAAGGCCTACGGGTGGTAGGTCCAGAATTCTATGGAACTGTAATCGAGCCATTCAAATACTTGAAGATCATGAAGTTTGAGGACATGCCCAACTGGGAAGAGTGGTCGACTGACAAACTTGAAAAAGGTGCGAGATTCCCTTCACTTCAAGAGCTTCACATTCAGAAATGTCCTAAATTGATAGGAAAGTTGCCTGATCAACTTCCTTCCTTAGATAAACTAGCGATAACAGCATGTCAAGCTCTCAAAGACTCAATGCCACGGGTTCCAAAATTGAGAGAACTTGAGCTAACTAGTTGCGATTCTTTGGTTTCATTGTCTGAGAACATGATGCAAGGAAATCAATGTCTTGAAACCATGACCATAAGGAATTGCTCATCGCTGGTCACCATCCCTAGAGATGGCTTACCAAGTACTCTAAGATCACTTGAGATTTATGAGTGCAGGAACTTACAAATATTGCAGGAATCTCACTGCTATCCTGCTCTTGAGCGATTGCACTTAAAATGTTGCTGTAAGTCTCTTATCTCCTTTCAATTATCCCTCTTCACCAACCTTGAAGATCTTCATGTACAAGACTGTACCAATCTTGACATGATTTTATCTGCTCCACATGGTCTCCCATATCTTCGAAAACTGAAATTGAAGGACTGCTCCAAACTCGTTTTGTTTCCTGAAGGAGGATTTCTTGCTCCCAAACTTGAGTCACTTTCTATCAGCAAATGCGTTAAGCTCTCTCCTAAGACTTCATGGGGTCTGCATGCAATGACATCATTAACTTCTCTTCATATCAGTGGATTCCCTGGTCTCACTTCACTAGACCACACAGGAATTCAGCACCTAACAACTCTCAAAGTTCTGAAGATTAAAGCTTGTGATAAGCTTGCCTGTCTACCCTTAGACAGGCTAGTCCACTCCCTTTCTCATCTTACCATCAAAGGATGTCGATTGTTAAAAGAGCTGTGTGAGAGAGACAGGGGGGAATACTGGAGCCTGGTTTCTCGCATACCCGTCAGCGTCATTGAAGACTAG 3459 0.4149 MVDMLGSFISAFLQVLLDRIARPELIDFFRGNHLDEALLEKLKMLLLSVTTVLTDAEEKQFIDPLVKEWVDRLKNAAYDADDILDEIATKALVDKMDSGFHTTLDKVRDYASSLNPFVERVKSKVERIVERLKSIIEHKDLLGLKEGGMGRSLLLASATTSLVDEHRVYGRNDDREKIIDFLLSGESNGEGVPVVAIVGMGGIGKTTLAQILYNDTRVRNHFQLRSWTSISETSDVRDISKKVFESFNLWYSNITDLNVLQIKLQEKLARQRFLLVLDGFWNENYLDWDIFQRPFLSGSWGSRIIVTTRSQSVALAIRADQTHSLSLLFHEDTWKLFSSHAFKSGNPDEYPALAQIGQKIVKKCNGLPLAAKTLGSLVRCKEDIEEWENIYNSKIWELPSDKSSILPALRLSYSHLPSQLKRCFSYCSIFPKGFEIKKWELIYLWMAEGILPQLEPEKRMEDTGDECFQELLSRSFFHQSAHHKSHFMMHDLINDLAQCVAGDFCYKLEDNNPSKTATWIRHLSYFQGIYDAPEKFESFSEFQQLRTFLPFKFSPFGSTSSITSMVSILLPKLRRLRVLSLSYYPITKLPNSIGDLIHLRYLDLAYTTTEHLPDSVSTLYNLETLILSGCHSLRKLPQNMFRLVNLRHLDISGSGVIEMPAKLGRLKSLQLLTNFVVSSGGGSKISELGELSELHGALLIVNLQDVADATEASNARLSSKKYLHKLEFKWTTTTHNVHREANVLNMLKPHQNVKRLKVQNFGGNGLPNWLGSSALSSMVFLHLAECDSCLSLPSLGQLPSLRELHIASMKGLRVVGPEFYGTVIEPFKYLKIMKFEDMPNWEEWSTDKLEKGARFPSLQELHIQKCPKLIGKLPDQLPSLDKLAITACQALKDSMPRVPKLRELELTSCDSLVSLSENMMQGNQCLETMTIRNCSSLVTIPRDGLPSTLRSLEIYECRNLQILQESHCYPALERLHLKCCCKSLISFQLSLFTNLEDLHVQDCTNLDMILSAPHGLPYLRKLKLKDCSKLVLFPEGGFLAPKLESLSISKCVKLSPKTSWGLHAMTSLTSLHISGFPGLTSLDHTGIQHLTTLKVLKIKACDKLACLPLDRLVHSLSHLTIKGCRLLKELCERDRGEYWSLVSRIPVSVIED* 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2567 1152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 427 IPR027417 -
Dod03g2567 1152 CDD RX-CC_like 53 137 IPR038005 -
Dod03g2567 1152 Gene3D Ribonuclease Inhibitor 537 894 IPR032675 -
Dod03g2567 1152 Gene3D - 328 417 IPR042197 -
Dod03g2567 1152 Gene3D Ribonuclease Inhibitor 895 1145 IPR032675 -
Dod03g2567 1152 Gene3D - 34 136 - -
Dod03g2567 1152 Pfam Rx N-terminal domain 8 95 IPR041118 -
Dod03g2567 1152 SUPERFAMILY RNI-like 888 1132 - -
Dod03g2567 1152 PANTHER - 48 942 - -
Dod03g2567 1152 Pfam NB-ARC domain 173 414 IPR002182 GO:0043531
Dod03g2567 1152 Gene3D - 418 498 IPR036388 -
Dod03g2567 1152 PANTHER DISEASE RESISTANCE PROTEIN RP 48 942 IPR044974 GO:0006952
Dod03g2567 1152 SUPERFAMILY L domain-like 480 980 - -
Dod03g2567 1152 PRINTS Disease resistance protein signature 194 209 - -
Dod03g2567 1152 PRINTS Disease resistance protein signature 267 281 - -
Dod03g2567 1152 PRINTS Disease resistance protein signature 364 378 - -
Dod03g2567 1152 PRINTS Disease resistance protein signature 617 633 - -
Dod03g2567 1152 Gene3D - 154 323 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2567 Dod-Chr3 57218492 57222950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2567 195 688 WRKY Transcription Factor Family AT5G45050 23.752 4.48e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2567 - - adu:107477502 1791.16