Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2562 ATGGGGTACCTCAACCTCTCTTGCAGAGCCGAATCCGCAGTCTCAACCTCCAATTCTCTCTCCCCATCACGCCCAACATCTTCATCTTCTCCTTCATCCTCAAAACAGAACAACAACAACAACAACAAACCCATCAAGATCCAGCACTTCCACTACAGTGACCTCGAAGCCGCCACCAATGGCTTCTCAGACCGCAAGCTCCTCGGCAAAGGAAGCCACGGCTATGTCTACAAGGCCGTCCTACGTGGCAGGCCCGTCGCAGTGAAAAGACCATCAAGACCCCATAACCTTCTCCCAAGACCAGTTTCTTCCTCTGCCCCTGTCTCTTCCTCTGAGGTAATAACCAACGAGGTTGACAACGAGATCGACATCTTGTCCAAGATTCAGAGCCCAATGTTGGTGAATTTGGTTGGTTTCACAAATGATTCCAAAGACAGGCTCTTGGTGGTTGAGTTCATGAGCAATGGCACACTCTATGATGTTCTTCATTCATCCAATAGGCCACCCAATTGGAGTAGGAGGATCCGTTTGGCTTTGCAAACTGCAAAAGCAATTGATACCCTTCATTCATCAACACCACCTGTGATTCATCGTGATATAAAGTCTGCAAATGTTCTCATTGACAGAAACTTCAATGCAAGGTTAGGTGATTTTGGTTTGGCTCTTAGGGGCCATGTTGATGATTATAGGCTAAGGTCAACTCCACCCGCTGGCACTATGGGGTACCTTGATCCTTGTTATGTGACTCCTGATAATTTGAGCACTAAGACTGATGTGTTTAGTTTTGGTATTTTGTTGTTGGAGATTATAAGTGGGAGGAAAGCCATTGATATCACTTATTCACCACCTTCTATTGTGGATTGGGCTATTCCTCTTATAAAGAAAGGGAAGCTTATGGCTGTTTATGATCCTAGGATTGCACCCCCTAAGGATCCTGTTGTGAGGAAGCAGCTTGCAGTGATTGCTGCAAAGTGTGTGAGGTCTTGTAGGGAGAGGAGGCCTTCCATGAATGAGATTGTGAATTGGCTTTGTGGGTTGTCAAAGTTGGTGCCTCTTCACTCATGGAATGGTTTTAACAACCCTTGCATGATGGTTGAGACTATGGGAAGGCCTGTTGAGGCAAGGAATGGACAATTAAGTTCAAGAATGGAAGGAGGAGGGGGTTTTGATGCCTTGGATGAGAGGTTGTCTAAGTCTGCAATGAAGTATTCAAGGAGAGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACCTTATGGCTACCACTGAGGAACCTGTGTTTCTAAGAGATGATGATAATGCTGATGGCGTGGAGCATAGTTCTAGATCTGCTGAGCAAGTTCCTAGCTCAAGGTTTGGCAGTGGAAGGTATTTCACAAGAGGGAGGAATCTTTACAGGCCTTGTGGTACTGATAGGGATGCATTTGACTTGAGTAAAGGCCAGAAGATTGTTAGTGAGGCTTCGAAACAGGATGATGGGGCTTCTGGTTCTACTTTGAATTCTCTGACTGCTGAGGTTATCTAG 1530 0.4582 MGYLNLSCRAESAVSTSNSLSPSRPTSSSSPSSSKQNNNNNNKPIKIQHFHYSDLEAATNGFSDRKLLGKGSHGYVYKAVLRGRPVAVKRPSRPHNLLPRPVSSSAPVSSSEVITNEVDNEIDILSKIQSPMLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSNRPPNWSRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLMAVYDPRIAPPKDPVVRKQLAVIAAKCVRSCRERRPSMNEIVNWLCGLSKLVPLHSWNGFNNPCMMVETMGRPVEARNGQLSSRMEGGGGFDALDERLSKSAMKYSRRVYSDLGFSSNLMDLMATTEEPVFLRDDDNADGVEHSSRSAEQVPSSRFGSGRYFTRGRNLYRPCGTDRDAFDLSKGQKIVSEASKQDDGASGSTLNSLTAEVI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2562 509 MobiDBLite consensus disorder prediction 433 454 - -
Dod03g2562 509 MobiDBLite consensus disorder prediction 490 509 - -
Dod03g2562 509 Gene3D Transferase(Phosphotransferase) domain 1 153 352 - -
Dod03g2562 509 ProSitePatterns Protein kinases ATP-binding region signature. 68 89 IPR017441 GO:0005524
Dod03g2562 509 ProSiteProfiles Protein kinase domain profile. 62 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2562 509 SMART serkin_6 62 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2562 509 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 494 - -
Dod03g2562 509 SUPERFAMILY Protein kinase-like (PK-like) 37 343 IPR011009 -
Dod03g2562 509 Pfam Protein kinase domain 63 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2562 509 MobiDBLite consensus disorder prediction 488 509 - -
Dod03g2562 509 PANTHER OS01G0750732 PROTEIN 1 494 - -
Dod03g2562 509 Gene3D Phosphorylase Kinase; domain 1 32 152 - -
Dod03g2562 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Dod03g2562 509 MobiDBLite consensus disorder prediction 14 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2562 Dod-Chr3 57184412 57186566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2562 50 343 Receptor kinase-like Gene Family AT3G59420 45.000 1.94e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod03g2562 Pkinase 5.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2562 - - gmx:100805692 766.918