Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2557 ATGGGCAAAGCAAGTTGCTCTGTCCTTCTATCCATTCTTATTCTTTCATTCTCTGTGGCTGAAATTCATGGGAGCAAGCAAGCTAGAGCTCTTGACAAGCTGCAAAAGTCCAAGTTTAGAGGAAGTTCACAAGTTGATAGGAGTGACTTTGAGGTACAAGAGCTTGAGCATGGTGCCATTGTTCATTCCCAGGAAGGCCTCAAAGAGAAAGATAGGATTGTGAGTCTTCCGGGGCAGCCCCCAGTGAAGTTCTCTCAGTATGGAGGGTATGTCACATTGGACAAATTTGCTGGCCGTGCCTTCTATTATTACTTTGTTGAAGCTCAGAGTTCTAAAGAAACACTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCAGGATGTTCATCTCTTGCCTATGGAGCAATGCAAGAACTTGGTCCCTTCCGAGTAAACAGTGATGGCAAAACACTATACAAAAATAGATATTCGTGGAACTATGCTGCAAATGTTTTGTTCCTGGAATCACCAACTGGGGTAGGATTTTCTTACTCAAACAGATCATCAGATTATAAGACCAATGGGGATAAGAAAACAGCTGCAGATAATTATTTGTTCTTGGTTAATTGGTTGGAGAGGTTTCCAGAATATAAGACCAGGGATTTCTACATTGCTGGGGAGAGTTATGCTGGGCACTATGTTCCTCAACTAGCGCACACTATTCTTTACCATAACAAGAAGGCAAACAATACAATAATCAACCTCAAAGGAATCATGATTGGGAATGCAGTGATCAACGATGACACTGACTCACGAGGGATGTATGATTTTCTTGCTAGCCATGCAATCATCTCAGACCAAGCAGCATATGATATCAACAAACTTTGTGATTTCTCATCCAAAAATACGACGAGTGTATGTGATGCTGCTGCAGAAGAAGTTGGCAAGGATATTTCCTACATTGATTTATACAATATTTATGCTCCCGTGTGCAAGAATTCCAATCTCACGGCCAAGCCCAAGAAGACTTCTGTTGTCACTGATCCCTGCAGTGAGTATTATGTGTATGCATATCTTAATAGGGAAGATGTCCAAGAGGCCCTCCATGCCAATGTCACCAAGCTCAAATATGACTGGGAACCCTGCAGTGATGTCATTTCAAAGTGGGTTGATAGCTCTTCAACAGTCCTTCCCCTTTTACATGAATTCCTCAATGATAGCCTTAGAGTTTGGATTTTCAGTGGTGACGTGGATGGAAGGGTGCCTGTCACTTCAACCAAGTATTCCATTAACAAGATGAACCTTCCCATTAAAACTGCTTGGCATCCTTGGTTCGCCTATGGAGATGTTGGTGGCTATACTGAAGTATACAAGGGAGGATTAACATTTGCTACAGTGAGAGGAGCTGGACATCAAGTGCCAAGCTACCAACCAGCAAGAGCTCTTTCTTTGATAAGACATTTCCTAAGTGGCACTCCTCTTCCTGATACCAAAAGACACGACTAG 1482 0.4271 MGKASCSVLLSILILSFSVAEIHGSKQARALDKLQKSKFRGSSQVDRSDFEVQELEHGAIVHSQEGLKEKDRIVSLPGQPPVKFSQYGGYVTLDKFAGRAFYYYFVEAQSSKETLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLYKNRYSWNYAANVLFLESPTGVGFSYSNRSSDYKTNGDKKTAADNYLFLVNWLERFPEYKTRDFYIAGESYAGHYVPQLAHTILYHNKKANNTIINLKGIMIGNAVINDDTDSRGMYDFLASHAIISDQAAYDINKLCDFSSKNTTSVCDAAAEEVGKDISYIDLYNIYAPVCKNSNLTAKPKKTSVVTDPCSEYYVYAYLNREDVQEALHANVTKLKYDWEPCSDVISKWVDSSSTVLPLLHEFLNDSLRVWIFSGDVDGRVPVTSTKYSINKMNLPIKTAWHPWFAYGDVGGYTEVYKGGLTFATVRGAGHQVPSYQPARALSLIRHFLSGTPLPDTKRHD* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2557 493 Gene3D - 388 483 - -
Dod03g2557 493 SUPERFAMILY alpha/beta-Hydrolases 73 487 IPR029058 -
Dod03g2557 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 487 IPR001563 GO:0004185|GO:0006508
Dod03g2557 493 PANTHER CARBOXYPEPTIDASE 9 487 - -
Dod03g2557 493 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Dod03g2557 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 453 470 IPR033124 GO:0004185
Dod03g2557 493 Gene3D - 342 378 - -
Dod03g2557 493 Gene3D alpha/beta hydrolase 67 325 IPR029058 -
Dod03g2557 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Dod03g2557 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Dod03g2557 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Dod03g2557 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Dod03g2557 493 Pfam Serine carboxypeptidase 77 483 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2557 Dod-Chr3 57117231 57123656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2557 350 486 Calmodulin-binding Proteins AT2G22960 32.847 2.17e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2557 K16297 - gmx:100783864 805.053