Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2538 ATGGAGCAAGTTCAAGACTCTCAACCTCAACCCCAATCTCTCGGTCAAGATGATGAAAATGAAATTGTTACTGAAAGTTCTGCTTTTGTGAAAGGGGAACTTCCACAAGAATATAGCATGCCTCCCAAAGTTGATTCTGAAGTTGAAGTCCTTCATGAGAAGGTCACCAAGCAAGTGATTAAGGAAGGCCATGGCCAGAAACCTTCCAAATACTCGACTTGCTTCATCCATTACAGGGGATGGTCCGAAAGCACGCAGCACAAGTTTGATGACACATGGCAGGAGCAACGACCAGTTGAGATGGTATTAGGAAAAGAAAAGAAAGAAATGACTGGCTTGGCCATTGGTGTGGCAAATATGAAAGTTGGTGAGCGTGCATTGCTGCGTGTGGGCTGGGAATTAGGATATGGAAAGGAAGGAAGTTTTTCTTTTCCAAATGTTCCTCCCATGGCAGATTTAGTTTATGAAGTTGAGCTTATTGGCTTTGATGAAACAAAAGAAGGGAAAGCTCGTGGTGATATGACTGTGGAGGAAAGGATTGGTGCAGCAGATCGAAGAAAGATGGATGGAAATGCTTTGTTTCAGCAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAATATAGGGATATGGCTTTGGCTGTAAAGAATCCATGCCATCTTAACATGGCAGCATGTCTGATTAAGCTGCATCAGTATGAAGAAGCTATAGGACAATGCAGCATTGTGCTGTCTGAGGATGAAAACAACGTTAAGGCGTTATTTAGGCGAGGTAAAGCTAGGGCAGCACTAGGGCAAACAGATGCTGCCAAGGAAGATTTTCTAAAAGCAAGAAAACATGTCCCTGAAGATAAAGCAATAGCAAAAGAATTGAGGTTGCTTGCAGAACACGAGAAGGTTGTTTACCAAAAGCAGAGAGAGTTATACAAAGGAATGTTTGGGCCAAGGCCAGAACCAAAACCTAAGGGAAGTAACTGGCTGATTCTCATTTGGCAGTGGCTGCTTTCAGTATTTTATGGTCTTATTAAGCTCTTCAAGCGTGAAAGGCACAAGTCTGACTAA 1113 0.4268 MEQVQDSQPQPQSLGQDDENEIVTESSAFVKGELPQEYSMPPKVDSEVEVLHEKVTKQVIKEGHGQKPSKYSTCFIHYRGWSESTQHKFDDTWQEQRPVEMVLGKEKKEMTGLAIGVANMKVGERALLRVGWELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKEGKARGDMTVEERIGAADRRKMDGNALFQQEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLHQYEEAIGQCSIVLSEDENNVKALFRRGKARAALGQTDAAKEDFLKARKHVPEDKAIAKELRLLAEHEKVVYQKQRELYKGMFGPRPEPKPKGSNWLILIWQWLLSVFYGLIKLFKRERHKSD* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2538 370 MobiDBLite consensus disorder prediction 1 24 - -
Dod03g2538 370 Gene3D Tetratricopeptide repeat domain 165 296 IPR011990 GO:0005515
Dod03g2538 370 SMART tpr_5 183 216 IPR019734 GO:0005515
Dod03g2538 370 SMART tpr_5 234 267 IPR019734 GO:0005515
Dod03g2538 370 SMART tpr_5 268 301 IPR019734 GO:0005515
Dod03g2538 370 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 67 160 IPR001179 GO:0003755
Dod03g2538 370 SUPERFAMILY TPR-like 175 316 IPR011990 GO:0005515
Dod03g2538 370 Gene3D - 39 164 IPR046357 GO:0003755
Dod03g2538 370 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 35 331 - -
Dod03g2538 370 SUPERFAMILY FKBP-like 32 169 - -
Dod03g2538 370 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 163 IPR001179 GO:0003755
Dod03g2538 370 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 35 331 - -
Dod03g2538 370 MobiDBLite consensus disorder prediction 1 23 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2538 48 336 Calmodulin-binding Proteins AT5G48570 33.108 9.16e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2538 - - gmx:100790587 655.981