Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2529 ATGGAGGCGGCGGTGGTGGACGTCGGGACTAAGCTCCTCAAAGCCGGTTTTGCAATTCCTGATCAGACTCCCGCCATGATAATTCCTACTCAGATGAAACGAGTGCCTGATGATGGGTCTGTGACTGATGATAATAGTTCACTAGCTGATAATGTCACAGTTGATCCAGTGGTGCGAGGGTTTATCAGAGATTGGGACGCCATCGAGGATTTGTTGTACCATGTTTTGTATACTGGCCTCGGGTGGGAAATCGGCAATGAAGGACAAATACTCTTTACAGATCCACTCTGCACCCCCAAGGCCAACAAGGAACAGTTGGTGCAGCTGATGTTTGAAACATTCAACATATCAGGGTTTTATGCCTCAGAACAAGCTGTGTTATCGCTGTATGCTGTGGGACGTATCTCAGGGTGCACAGTTGATATTGGACATGGAAAAATAGATATTGCGCCAGTAATAGAGGGTGCTGTTCACCACATTGCATCAAGAAGATTTGAGCTTGGAGGTACCGATCTAACTAATTTCTTGGCCCAAGAACTTGGCAAATCCAATCCACAAGTAAACTTCAGCATGTCTGATGTGGAGAAAATCAAAGAGCAATACTCATGTTGTGCTGAAGATGAACTAGCTTATCAGAAGACCGAAGATTCTTGTCCTGTGGAGAAACATACCCTTCCTGATGGACAGGTGATAACAATTGGCAGAGAACGATATACCGTAGGCGAGGCTTTATTCCAGCCATCTCTATTAGGTCTAGAGGCTCATGGCATTGTTGAGCAGCTTGTTCGTGCTATTTCAACTGTGTCATCTGATAATCAACGGCAGCTGCTGGAAAATACTGTTGTGTGTGGTGGCACTTCTTCTATGAATGGTTTTGAAGATAGATTTCAGAAGGAATCTAGCTTAAGTTCATCTGCCGTTCAACCTACCCTCGTAAAGCCTCCAGAATACATGCCAGAAAACTTAACCCTCTATTCAGCATGGGTTGGAGGTGCCATTCTTGCCAAAGTAGTTTTCCCTCAGAATCAGCATATAACTAAGGGAGATTATGATGAAACTGGACCTTCCATTGTTCACCGGAAATGCTTTTGA 1092 0.446 MEAAVVDVGTKLLKAGFAIPDQTPAMIIPTQMKRVPDDGSVTDDNSSLADNVTVDPVVRGFIRDWDAIEDLLYHVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIASRRFELGGTDLTNFLAQELGKSNPQVNFSMSDVEKIKEQYSCCAEDELAYQKTEDSCPVEKHTLPDGQVITIGRERYTVGEALFQPSLLGLEAHGIVEQLVRAISTVSSDNQRQLLENTVVCGGTSSMNGFEDRFQKESSLSSSAVQPTLVKPPEYMPENLTLYSAWVGGAILAKVVFPQNQHITKGDYDETGPSIVHRKCF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2529 363 PANTHER ACTIN 1 362 IPR004000 -
Dod03g2529 363 CDD NBD_sugar-kinase_HSP70_actin 4 168 - -
Dod03g2529 363 PRINTS Actin signature 47 69 IPR004000 -
Dod03g2529 363 PRINTS Actin signature 102 115 IPR004000 -
Dod03g2529 363 PRINTS Actin signature 219 235 IPR004000 -
Dod03g2529 363 PRINTS Actin signature 127 146 IPR004000 -
Dod03g2529 363 SMART actin_3 1 363 IPR004000 -
Dod03g2529 363 Gene3D - 5 357 - -
Dod03g2529 363 SUPERFAMILY Actin-like ATPase domain 2 140 IPR043129 -
Dod03g2529 363 SUPERFAMILY Actin-like ATPase domain 133 363 IPR043129 -
Dod03g2529 363 Pfam Actin 2 363 IPR004000 -
Dod03g2529 363 Gene3D Actin; Chain A, domain 4 167 254 - -
Dod03g2529 363 PANTHER BNACNNG31150D PROTEIN 1 362 - -
Dod03g2529 363 Gene3D - 125 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2529 Dod-Chr3 56856087 56860774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2529 5 363 Cytoskeleton Gene Families AT3G12110 39.200 1.59e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2529 K16615 - gmx:100813266 686.026