Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2525 ATGGCCAACCATAGATGTCACCATGTTATCTGCCTTGAAATTCAAGCTACTTTGGTGGTTTTGCTGGCTCTCTGTCATGGCATGTCAGGGCTAATAACAGAAGCTGAGGCCTTGCTGAGGTGGAAACAAAGTCTCCCTCCACAACCAATTTTGGATTCATGGGTGAACAACTCTAGTGCAACTCAAATTCCATGTTCATGGAGAGGGATCAATTGTGACTCAAAAGGAAGTGTGACTATAATAAACTTGGCATACACTGGACTTGCAGGTACCCTTGATAACTTGAACTTTTCTGCTTTTCCAAACCTTCTACGCCTTGATCTCAAAACAAACAACCTCACTGGCACTATACCACAAGACATTGGGGTGCTCTCAAAACTCCAATTCCTTGACCTTTCCACTAACTATCTCAATGGCACAGTACCTCTTTCTATAGCCAACCTCACTCAAGTCTATGAGCTTGATATGTCAAGGAATAACATATCAGGAATATTAGACCCTCATTTGTTTCCTGATGGAACTGATGAGCCAAAAACTGGCCTAATTAGTATCAGGAATCTACTCTTCCAAGACACCCTCTTAGGTGGAAGAATTCCGAATGAAATAGGCAACATAAGGAACTTGACTGTGCTAGCTCTTGATGGGAACAATTTTCATGGGCCTATTCCTCCATCATTAGGCAATTGTACACATTTAAGCATTCTTAGGATGCCTCAAAACCAGCTCTCAGGTCCAATACCCCCTAGTATTGGCAAGTTAACCAACCTAACTGATGTGCGGCTTTTCACCAACAACTTGAATGGTACGGTGCCACAAGAGCTTGGGAACTTGTCTTCTTTGGTTGTGCTGCATCTTGCTGAGAACAACTTCACTGGTGAATTGCCACCCCAAGTGTGCAAAGGTGGGAAGCTAGTGAATTTCAGTTCATCCTACAATGGTTTCACTGGTCCCATTCCAGTGAGCCTTAGAAACTGCCCAAGTTTGTACAGGGTTAGAATGGAATACAGCCAACTGACAGGTTATGCTGATGAGGACTTTGGAGTGTATCCTAACCTCACATATATTGATTTCAGCTATAACAGGATCCAAGGTGAGCTATCTTCAAATTGGGGTGCCTGCAAAAACTTGCAATCACTTAGAATGGCGGGGAATTCCATAAGTGGGAACATTCCAGGTGAAATTCTTCAGTTGGACCAATTGGTAGAGCTGGTCCTATCCTCCAACCAAATATCAGGAGAGATTCCTCCACAGATAGGAAATTTATCCAGCTTGTATGAATTAAATTTGAGTGGCAACATACTTTCTGGTATGATACCTGCAGAAATTGGAAAGCTTTCCAATCTGCAGTCTTTAGACCTATCAACGAACATGCTATTGGGACCTATCCCAAATCAGATAGGGGACTGCTCCAACCTGCAGAATCTAAATTTGAGCAATAATGGCTTGAATGGCATAATCCCCTACCAGATTGGAAATCTTGCAGCCTTACAAGAATATTTGGACTTGAGCTACAATTCACTTTCAGGTCAAATTCCTGCTGATCTTGGCAAGCTTACAAATTTGATAAGCTTGAATATTTCTCACAACAATCTTTCAGGCCCTATCCCTGGGTCCCTCAGTGGAATGCTGAGCTTGTCAGCCATCAACCTCTCCTACAATCATTTGGAAGGACCTGTGCCTAACAGTGGCATATTCAACTCTTCGCATCCAGTGGATTTGAGCAACAACAAAGATTTGTGTGGTAATATCCAAGGTTTGAGACCTTGTGATGTCTCACTCACTGAACCTAGTGGTGGAAGTAACAAAAACAAGGTTGCAGTACCCCTTGTTGCTTCTTTAGGAGGTGCTTTATTTCTTTCATTGGTGTTAGTTGGGATTTTTGTCATTTGCAATAAGAGGAAGTCAGTAGTTTCAAGACAAAACTCTCCAAACGAGAGACACAAAAATCCATTTTCAATTTGGTACTTTAATGGAAGAATAATGTATGGAGACATAATTGAAGCTACCAAGAACTTTGATAACCAGTACTGCATTGGGGAGGGAGCACTAGGAAAAGTTTATAAGGCAGTGATGCGAGGAGGCCAAGTATTTGCTGTAAAAAAGTTGAAATGTGATGCTGACAACTTAGACATTGAGAGTATAAAAACCTTCAAGAGTGAAGTAGAAGCCATGACAGAAATGCGCCACCGGAGCATTGTGAAGCTCTATGGATTTTGCTCTGAAGGGTTACACACATTCTTGATTTATGAGTATATGGATAGAGGGAACTTAGCTGATATCCTAAGAAATGATCACAAAGCTGTAGACCTGGAGTGGCCTAAGAGGGTTGATATTGTCAAAGGTGTAGCGAGCGCTTTGTCTTATATGCATCATGATTGTGCTCCACCTTTGATCCACAGAGACATATCAAGCAAGAACATTTTGTTGTCCTCCAATCTTGAAGCTCATGTCTCAGATTTTGGCACTGCCAGGTTTCTGAAGCCTGATTCGCCGATTTGGACATCATTTGCAGGCACATATGGATATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTTAGCTTTGGTGTTTTGGCTCTAGAGGTTCTCAGTGGAAGACACCCTGGTGATCTTGTTTCCTATATACAAACTTCTACAGATCAGAAGATAAACTTCAAAGAGATTTTAGATCCACGCCTCTCACCTCCTGCAAATAAGCATGTTTTGAAGGAATTGGCATTGATTGCGAACCTTAGTCTTTCATGTTTACAAGCAAATCCTCAATCTCGACCAACCATGCGAAGCATTGCTCAATTGCTTGAAATGGACACAACAGATGATAACTTGTGA 2850 0.4196 MANHRCHHVICLEIQATLVVLLALCHGMSGLITEAEALLRWKQSLPPQPILDSWVNNSSATQIPCSWRGINCDSKGSVTIINLAYTGLAGTLDNLNFSAFPNLLRLDLKTNNLTGTIPQDIGVLSKLQFLDLSTNYLNGTVPLSIANLTQVYELDMSRNNISGILDPHLFPDGTDEPKTGLISIRNLLFQDTLLGGRIPNEIGNIRNLTVLALDGNNFHGPIPPSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRLFTNNLNGTVPQELGNLSSLVVLHLAENNFTGELPPQVCKGGKLVNFSSSYNGFTGPIPVSLRNCPSLYRVRMEYSQLTGYADEDFGVYPNLTYIDFSYNRIQGELSSNWGACKNLQSLRMAGNSISGNIPGEILQLDQLVELVLSSNQISGEIPPQIGNLSSLYELNLSGNILSGMIPAEIGKLSNLQSLDLSTNMLLGPIPNQIGDCSNLQNLNLSNNGLNGIIPYQIGNLAALQEYLDLSYNSLSGQIPADLGKLTNLISLNISHNNLSGPIPGSLSGMLSLSAINLSYNHLEGPVPNSGIFNSSHPVDLSNNKDLCGNIQGLRPCDVSLTEPSGGSNKNKVAVPLVASLGGALFLSLVLVGIFVICNKRKSVVSRQNSPNERHKNPFSIWYFNGRIMYGDIIEATKNFDNQYCIGEGALGKVYKAVMRGGQVFAVKKLKCDADNLDIESIKTFKSEVEAMTEMRHRSIVKLYGFCSEGLHTFLIYEYMDRGNLADILRNDHKAVDLEWPKRVDIVKGVASALSYMHHDCAPPLIHRDISSKNILLSSNLEAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLALEVLSGRHPGDLVSYIQTSTDQKINFKEILDPRLSPPANKHVLKELALIANLSLSCLQANPQSRPTMRSIAQLLEMDTTDDNL* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2525 949 SUPERFAMILY RNI-like 246 576 - -
Dod03g2525 949 SMART LRR_typ_2 397 421 IPR003591 -
Dod03g2525 949 SMART LRR_typ_2 518 541 IPR003591 -
Dod03g2525 949 SMART LRR_typ_2 277 301 IPR003591 -
Dod03g2525 949 SMART LRR_typ_2 148 172 IPR003591 -
Dod03g2525 949 SMART LRR_typ_2 445 469 IPR003591 -
Dod03g2525 949 SMART LRR_typ_2 205 229 IPR003591 -
Dod03g2525 949 SMART LRR_typ_2 100 124 IPR003591 -
Dod03g2525 949 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Dod03g2525 949 SUPERFAMILY Protein kinase-like (PK-like) 649 943 IPR011009 -
Dod03g2525 949 SUPERFAMILY RNI-like 75 295 - -
Dod03g2525 949 ProSiteProfiles Protein kinase domain profile. 672 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2525 949 Gene3D Ribonuclease Inhibitor 175 268 IPR032675 -
Dod03g2525 949 Gene3D Ribonuclease Inhibitor 269 591 IPR032675 -
Dod03g2525 949 Gene3D Phosphorylase Kinase; domain 1 632 751 - -
Dod03g2525 949 ProSitePatterns Tyrosine protein kinases specific active-site signature. 797 809 IPR008266 GO:0004672|GO:0006468
Dod03g2525 949 Gene3D Transferase(Phosphotransferase) domain 1 752 948 - -
Dod03g2525 949 Gene3D Ribonuclease Inhibitor 31 111 IPR032675 -
Dod03g2525 949 Gene3D Ribonuclease Inhibitor 112 174 IPR032675 -
Dod03g2525 949 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 7 944 - -
Dod03g2525 949 SMART serkin_6 672 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2525 949 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Dod03g2525 949 Pfam Leucine rich repeat 499 555 IPR001611 GO:0005515
Dod03g2525 949 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 944 - -
Dod03g2525 949 PRINTS Leucine-rich repeat signature 445 458 - -
Dod03g2525 949 PRINTS Leucine-rich repeat signature 127 140 - -
Dod03g2525 949 Pfam Protein kinase domain 677 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2525 Dod-Chr3 56794447 56797732 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2525 12 845 Receptor kinase-like Gene Family AT4G08850 39.612 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g2525 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2525 - - aprc:113866080 1535.78