Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2519 ATGAAGAAGCCTTTTCTCTTCTTTCTCATCACATTCTCCTTCTTTGCCCAAACACACCTCCAACTAGCCTCCTCTGCTACGACATCACCACAATCCCTCCAACTCATCTCCTTGCTCTCAATAAAAGCCTCCCTCATAGACTCTCTCAAGACCCTCCATGACTGGGACCCTTCCCCAGCAACCTTCAATAATCAAGACCACCCCATATGGTGTTCATGGACAGGCATCACTTGCCACCCCACAACATCCCAAATCACAACCTTAGACCTCTCTCACCGCAACCTCTCGGGCACAATCTCACCCCAAATCAGGCACCTAACCACCCTCAACCACTTGAACCTCAGTGGAAACGACTTCAGTGGAACATTCCAAGCAGCAATCTTTGAACTCACTGAGCTCAGGACACTAGACATAAGCCACAACTCCTTCAACTCAACTTTCCCACCAGGGATATCAAAGCTCAAGTTCCTCAGAATCTTCAACGCTTACAGCAACAACTTCATTGGCCCTTTGCCCCAAGAGCTCATCAGGCTCCGTTTCCTTGAACAGCTCAACCTAGGAGGAAGCTACTTCAACGACACAATCCCAGAAGGTTATGGAACCTTCCCAAGACTCAAGTTCCTGCACTTAGCTGGCAATGCACTGGAAGGTCCACTACCGCCAAAACTAGGTTCCCTATCAGAGCTAGAACACTTGGAAATCGGTTACAACCCATTCTCAGGACCATTGCCACTGGAACTGTCACAGTTATCAAACCTCAGATACATGGACATCTCATCTACCAACATTTCAGGTTCACTTTTCCCACAACTGGGGAACTTAACCATGCTGGAAACACTGTTACTGTTCAAGAATCGGTTAACCGGTGAAATCCCATCAAGCTTAGGGAACCTGAAACCACTTCAAGCTCTTGATTTGTCAGAAAACCAACTCACTGGCTCAATTCCAAACGAACTCTCAATGCTGAAGGAACTAACGATGTTGAGCCTAGTTGATAACAACTTAACAGGCACAGTTCCAGAAAGAATTGGTGACCTTCCGAACCTGGAAACTCTCCTCCTCTTCAACAACTCACTCACTGGTATCCTTCCACAACAACTTGGGTTTAACGGTTTGCTAGTGAGAGTTGATGTTTCAACTAACTCGCTGCAGGGTCCGGTTCCTCCGAACCTCTGCAACGGAAACAGGCTTGTGAAGCTCATTCTGTTTGATAACGAATTTAACGGCTCGCTACCGGAGTCATTTGCTAACTGCACCTCGCTGACGAGGGTTCGGATGCAGAATAACCGCCTCAACGGTCAGATTCCGTTGGGATTCGGCCAACTGCCAAACCTCACATTTCTTGACATCAGCAATAACCGCTTCAACGGCCGAATCCCCGAGGATTTCGGCAATGCTGTTAGGCTTCAGTATCTCAACGTCTCCGGCAACGCGTTCTGGAGCGCGCTGCCGAGCAACATCTGGAACGCCACCAGCCTCCAGATTTTCTCCGCCGCGGAGTCGAACATCACCGGCGAGATTCCCGATTTCGCAGGGTGCGGAACCATCTACAGGATCGAGTTGCAGGGGAATTTGTTGAATGGGAGCATTCCGTGGAAAATCGGGCACTGCGAGAAGCTGATTCAGTTGAATCTGAGTAGAAACTCGCTCACCGGAATTATTCCTTGGGAGATCTCGGCGCTGCCTTCGATCACCGACGTGGACCTCTCGCACAACTCGCTCACCGGAACAATTCCTTCGAACTTCAACAACTGCACCACGCTCGAGAACTTCGACGTAAGCTTCAACTCGCTCTCCGGTCCGATTCCTTCGTCGGGGGTCTTCGCTGGCCTCCACCCGTCGTCGTACTCCGGCAACCAGGGACTCTGCGGCGGCGTCCTCTCGAAGCCTTGCGCGGCGGACGCCCTCGCGGCCGCGGACAACCAAATCGACGGTCGCAGGCCGCAGCCGAAGAGAACCGCTGGCGCGATCGTGTGGATCGTTGCGGCGGCGTTCGGGATCGGGGTTTTCGTTCTGGTCGCCGGGACGCGGTGCTTCCACGCGAATTACGGTCGACGGTTCGGTAACGACGGGCAGGAGATCGGGCCGTGGAAGTTAACGGCGTTTCAACGGCTGAATTTCACGGCGGAGGATGTCCTAGAGTGCTTGTCGATGTCTGACAAGATATTGGGGATGGGGTCCACTGGGACGGTTTACAGGGCGGAGATGCCAGGTGGCGAGATCATAGCGGTGAAGAAGCTGTGGGGGAAACAGAAGGAGAGTATCCGACGGCGGAGAGGGGTTCTTGCTGAGGTGGAGGTGTTGGGGAACGTGAGGCACAGGAACATAGTGAGGTTGTTAGGGTGCTGCAGCAACAGGGAGTGCACGATGCTGCTTTACGAGTACATGCCGAATGGGAACTTGGATGACTTGTTGCATGGGAAGAACAAGGGGGATAATCTGGTGGCTGATTGGTTCACGAGGTACAAGATTGCGCTGGGGGTGGCGCAGGGGATCTGCTACCTCCACCACGATTGTGATCCCGTGATCGTGCATCGGGATCTCAAACCCAGTAACATATTATTGGACGGTGAGATGGAGGCCAGAGTGGCAGATTTCGGTGTCGCCAAGCTCATCCAGACCGACGAGTCCATGTCTGTCATTGCTGGATCCTATGGCTACATTGCTCCAGAATATGCCTACACACTTCAAGTTGATGAGAAGAGTGATATTTACAGCTACGGGGTTGTATTAATGGAGATTTTAAGTGGGAAACGTTCGGTGGATGCAGAATTCGGAGATGGGAATAGCATTGTGGATTGGGTTAGGTCCAAGATCAAGAATAAAGACGGCATGGATGATATACTGGACAAGAATGCAGGGGCAGGGTGCTCCTCGGTGAGGGAGGAGATGATACAAATGCTTAGGATTGCATTGCTTTGCACTAGCAGGAACCCTGCGGATAGGCCTTCAATGAGAGATGTTGTGTTGATGCTGCAAGAGGCCAAGCCAAAGAGGAAATTGCTTGATAGTGTTGTTGTAGGTCGATGTGGTGGTGGTGACAATGTGGTTGGTGGTGGTGGTGACATTCCTTTGGCACAAAAGCCAACGGCGGAAAGCTAA 3102 0.5164 MKKPFLFFLITFSFFAQTHLQLASSATTSPQSLQLISLLSIKASLIDSLKTLHDWDPSPATFNNQDHPIWCSWTGITCHPTTSQITTLDLSHRNLSGTISPQIRHLTTLNHLNLSGNDFSGTFQAAIFELTELRTLDISHNSFNSTFPPGISKLKFLRIFNAYSNNFIGPLPQELIRLRFLEQLNLGGSYFNDTIPEGYGTFPRLKFLHLAGNALEGPLPPKLGSLSELEHLEIGYNPFSGPLPLELSQLSNLRYMDISSTNISGSLFPQLGNLTMLETLLLFKNRLTGEIPSSLGNLKPLQALDLSENQLTGSIPNELSMLKELTMLSLVDNNLTGTVPERIGDLPNLETLLLFNNSLTGILPQQLGFNGLLVRVDVSTNSLQGPVPPNLCNGNRLVKLILFDNEFNGSLPESFANCTSLTRVRMQNNRLNGQIPLGFGQLPNLTFLDISNNRFNGRIPEDFGNAVRLQYLNVSGNAFWSALPSNIWNATSLQIFSAAESNITGEIPDFAGCGTIYRIELQGNLLNGSIPWKIGHCEKLIQLNLSRNSLTGIIPWEISALPSITDVDLSHNSLTGTIPSNFNNCTTLENFDVSFNSLSGPIPSSGVFAGLHPSSYSGNQGLCGGVLSKPCAADALAAADNQIDGRRPQPKRTAGAIVWIVAAAFGIGVFVLVAGTRCFHANYGRRFGNDGQEIGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGEIIAVKKLWGKQKESIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVRSKIKNKDGMDDILDKNAGAGCSSVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSVVVGRCGGGDNVVGGGGDIPLAQKPTAES* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2519 1033 Gene3D Ribonuclease Inhibitor 35 320 IPR032675 -
Dod03g2519 1033 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 1020 - -
Dod03g2519 1033 Pfam Leucine rich repeat N-terminal domain 35 78 IPR013210 -
Dod03g2519 1033 Pfam Leucine rich repeat 277 335 IPR001611 GO:0005515
Dod03g2519 1033 Pfam Leucine rich repeat 420 478 IPR001611 GO:0005515
Dod03g2519 1033 Gene3D Ribonuclease Inhibitor 322 638 IPR032675 -
Dod03g2519 1033 Gene3D Transferase(Phosphotransferase) domain 1 796 1006 - -
Dod03g2519 1033 SUPERFAMILY Protein kinase-like (PK-like) 720 992 IPR011009 -
Dod03g2519 1033 Gene3D Phosphorylase Kinase; domain 1 698 795 - -
Dod03g2519 1033 ProSiteProfiles Leucine-rich repeat profile. 300 322 IPR001611 GO:0005515
Dod03g2519 1033 SMART LRR_typ_2 442 465 IPR003591 -
Dod03g2519 1033 SMART LRR_typ_2 346 369 IPR003591 -
Dod03g2519 1033 SMART LRR_typ_2 130 154 IPR003591 -
Dod03g2519 1033 SMART LRR_typ_2 202 226 IPR003591 -
Dod03g2519 1033 SMART LRR_typ_2 561 584 IPR003591 -
Dod03g2519 1033 SMART LRR_typ_2 467 490 IPR003591 -
Dod03g2519 1033 SMART LRR_typ_2 274 298 IPR003591 -
Dod03g2519 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Dod03g2519 1033 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 1 1020 - -
Dod03g2519 1033 PRINTS Leucine-rich repeat signature 301 314 - -
Dod03g2519 1033 PRINTS Leucine-rich repeat signature 442 455 - -
Dod03g2519 1033 ProSitePatterns Protein kinases ATP-binding region signature. 723 746 IPR017441 GO:0005524
Dod03g2519 1033 SMART serkin_6 717 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2519 1033 Pfam Leucine Rich Repeat 539 561 IPR001611 GO:0005515
Dod03g2519 1033 SUPERFAMILY L domain-like 372 624 - -
Dod03g2519 1033 SUPERFAMILY RNI-like 88 408 - -
Dod03g2519 1033 ProSiteProfiles Protein kinase domain profile. 717 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2519 1033 Pfam Protein kinase domain 720 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2519 Dod-Chr3 56706215 56711209 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2519 1 1000 Receptor kinase-like Gene Family AT1G08590 42.815 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g2519 Pkinase 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2519 - - adu:107495590 1681.77