Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2504 ATGAATACTTTTTCTCATGTTCCCCCCGGTTTTAGGTTCCACCCCACGGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAGGTTTCTTCAAGGAGGATTGACCTTGATGTAATAAAAGATGTTGACCTTTACAAAATTGAGCCATGGGATCTTCAAGAGATTTGCAAAATAGGTGCAGAAGAGCAAAATGAATGGTACTTCTTTAGTCATAAAGATAAGAAGTATCCAACTGGAACACGTACAAATAGAGCAACAACAGCAGGATTTTGGAAAGCAACAGGAAGAGACAAGTCAATCTATTCTAAGCATGATCTTATAGGGATGAGAAAAACTTTAGTCTTTTATAAAGGTCGAGCTCCAAATGGACAAAAATCGGATTGGATAATGCATGAGTATCGACTTGAAATAGATGAAAATGGTACACCACAGGCAAGTTTCTAA 444 0.3739 MNTFSHVPPGFRFHPTDEELVDYYLRKKVSSRRIDLDVIKDVDLYKIEPWDLQEICKIGAEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKSIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLEIDENGTPQASF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2504 147 ProSiteProfiles NAC domain profile. 7 147 IPR003441 GO:0003677|GO:0006355
Dod03g2504 147 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 143 - -
Dod03g2504 147 SUPERFAMILY NAC domain 5 140 IPR036093 GO:0003677|GO:0006355
Dod03g2504 147 Gene3D NAC domain 16 146 IPR036093 GO:0003677|GO:0006355
Dod03g2504 147 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 143 - -
Dod03g2504 147 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2504 Dod-Chr3 56572346 56572904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2504 1 144 NAC Transcription Factor Family AT1G12260 88.194 4.95e-98 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g2504 NAM 2.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2504 - - qsu:112007201 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2504 03 56572346 56572904 Dod03g2504 03 56572346 56572904 ECH