Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2503 ATGGCTATCATGGGAAGAAACATATTCTTGACACTGTTATTGTTGTCATCGGTGTTCTCAATAGCCTCATCATCAAGAAGGAGAACATCATCATCTTCCTGCAGCAGCAACATAGATTGGTGGTGCAACCGAACCCCACACCCGGAGCCATGCAAATTCTACATGAAACAAAGCCACAGCCATTACAGGCTGAAACATAAAACCGAGTTCCGTTCAATTCTTGTTCACTTGGCCTTAGAGAGAGCACTCATCATGCAAAGGCAAGCACATGATTTCGGACAAGACAAATCAACCAAGAAGCAGAGATCAGTGTTCGGTGATTGTCTGAAGCTCTATGACAACACCGTGTTCCACCTAAACCGCACCCATCATGGCCTTCACACCAAGAGAAGCTGTTCACCTTTTGATGTACAAACATGGCTCAGCACTGCTCTAACAAACATCGAAACATGCAAGAAAATGGCCATAGATCTCGGAGTTCCACATTTCGTCGTGCCTAATGCCACCAGCAATGTGACTGATATTATAAGCAATAGCTTAGCCGTGAATTCGGCTTTGCTGAAACTGGAAAAAGAATATTCCACAGATGACAATACGGAAGATGCTTTTCCAAGGTGGTTTTCAATGCGTGACAGGAAGTTGTTGCAGGCTACAACTATAAAGGCACATCTTGTGGTGGCAAAAGATGGTTCTGGGCATTTCACGACAGTGCAAGCTGCTATCAATGCAGCGGCAAAGAGGAGGAACAAGTCGAGATTTATCATACATGTGAAGAAAGGGGTTTATAGGGAGAACATTGAGGTTGACAAGACCAACGACAACATCATGTTGGTTGGTGATGGGATGAGATATACCATAATAGCAAGTGGTAGGAGCGTTCAACAAGGCTATACTACCTATAGCTCTGCAACAGCAGGAATTGATGGACTACACTTCATCGCACGTGACATCACCTTCCAGAACACGGCGGGTCCACTCAAGGGCCAAGCAGTGGCGCTACGATCAGCGTCCGATCTCTCCGTATTCTACCGCTGCACCATCGCCGGCTATCAAGACACCCTCATGGCTCACGCACAGCGACAATTCTACCGAGGTTGTTACATCTACGGCACCGTTGACTTCATCTTCGGCAACGCCGCGGTGGTCTTTCAAAACTGTGTGATCCTCGTAAGAAAGCCCTTGAGTGGCCAGGCCAACATGATCACGGCCCAAGGTCGAGATGACCCATTTCAAAACTCAGGGATCTCAATTCACAACTCTCAGATTCGGGCCGCACCGGACCTCAGGCCCGTTGTCGCTAGCTTCACCACGTTCTTGGGCCGGCCCTGGCAGAAATACTCCAGAGTGGTGATCATGAAAACATACATAGACTCGTTGGTGAGCCCATCGGGCTGGTCTCCATGGGGGAACACTAATTTTGCTCAGAGCACGTTGTATTATGGAGAGTACAAGAACTTTGGGCCTGGGTCATCCACAAAAAACAGGGTTCGCTGGCCCGGTTATCATGTTTTGACCACACCAGCTCAAGCGTCACCCTTCACGGTGGCTAGCCTCCTTGCTGGCGGCACGTGGTTGCCTGCCACTGGCGTGCCATTTACTTCTGGACTATAA 1611 0.4854 MAIMGRNIFLTLLLLSSVFSIASSSRRRTSSSSCSSNIDWWCNRTPHPEPCKFYMKQSHSHYRLKHKTEFRSILVHLALERALIMQRQAHDFGQDKSTKKQRSVFGDCLKLYDNTVFHLNRTHHGLHTKRSCSPFDVQTWLSTALTNIETCKKMAIDLGVPHFVVPNATSNVTDIISNSLAVNSALLKLEKEYSTDDNTEDAFPRWFSMRDRKLLQATTIKAHLVVAKDGSGHFTTVQAAINAAAKRRNKSRFIIHVKKGVYRENIEVDKTNDNIMLVGDGMRYTIIASGRSVQQGYTTYSSATAGIDGLHFIARDITFQNTAGPLKGQAVALRSASDLSVFYRCTIAGYQDTLMAHAQRQFYRGCYIYGTVDFIFGNAAVVFQNCVILVRKPLSGQANMITAQGRDDPFQNSGISIHNSQIRAAPDLRPVVASFTTFLGRPWQKYSRVVIMKTYIDSLVSPSGWSPWGNTNFAQSTLYYGEYKNFGPGSSTKNRVRWPGYHVLTTPAQASPFTVASLLAGGTWLPATGVPFTSGL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2503 536 SMART PMEI_2 33 182 IPR006501 GO:0004857
Dod03g2503 536 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 187 IPR035513 -
Dod03g2503 536 CDD PMEI-like_3 40 188 - -
Dod03g2503 536 Pfam Plant invertase/pectin methylesterase inhibitor 37 181 IPR006501 GO:0004857
Dod03g2503 536 Gene3D - 217 536 IPR012334 -
Dod03g2503 536 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 187 IPR035513 -
Dod03g2503 536 PANTHER PECTINESTERASE 1 535 - -
Dod03g2503 536 PANTHER PECTINESTERASE 1 535 - -
Dod03g2503 536 Pfam Pectinesterase 224 521 IPR000070 GO:0030599|GO:0042545
Dod03g2503 536 SUPERFAMILY Pectin lyase-like 218 535 IPR011050 -
Dod03g2503 536 ProSitePatterns Pectinesterase signature 1. 249 268 IPR018040 -
Dod03g2503 536 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
Dod03g2503 536 ProSitePatterns Pectinesterase signature 2. 368 377 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2503 Dod-Chr3 56552220 56554551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2503 35 536 Carbohydrate Esterase AT5G51500 60.039 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2503 K01051 - gmx:100807908 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2503 03 56552220 56554551 Dod03g2503 03 56552220 56554551 ECH