Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2499 ATGGAGGCCATTTCTTCTAAGCGCCTTATTATTATTTTAATTTCATCCCTTCTCATAATTCTTTTCACTAGTGATTTCATCACACACAATAATGCCCAAGCCACTGGAAGGCCATACCAACAAGCCAGCACAGGTTTCATTAAAAGCTCGTGCAGTTGCACAACATACCCAAGACTATGCTATAGCTCACTGGTGAAGCACGCAGACCTGATCCAAACAAACCGTGTGGTGTTAACGGGCACAGCACTCAATGTGACTCTCTCATCCGCAAAATCAACCTCGGCAGCCATGTCGATTCTTGCGAAGAGGCGCGGCTTGAAGCCGAGAGAGGTTGGAGCCATGAAGGACTGTGTGGAGGAGCTGAGTGACTCCGTGGATGAACTGAGGAGGTCAATTGGTGAGATGGGTAATCTCAGGACATCAAATTTTGAACTGACAATGAGTGACGTGCAAACATGGGTTAGTGCTGCCCTGACGGATGAGAGTACTTGTACCGATGGCTTCCAAGATACTACTGCTACTGCTAGTGCCGCGGGGGAAGATGATATTAAGACCACTGTGCGAGGGAGAATTGTGGAGGTAGCTCAATTGACTAGCAATGCCTTGGCTTTGATAAACCAGCTTGCCATTTCCCATGCTTAA 642 0.4735 MEAISSKRLIIILISSLLIILFTSDFITHNNAQATGRPYQQASTGFIKSSCSCTTYPRLCYSSLVKHADLIQTNRVVLTGTALNVTLSSAKSTSAAMSILAKRRGLKPREVGAMKDCVEELSDSVDELRRSIGEMGNLRTSNFELTMSDVQTWVSAALTDESTCTDGFQDTTATASAAGEDDIKTTVRGRIVEVAQLTSNALALINQLAISHA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2499 213 CDD PMEI-like_3 49 209 - -
Dod03g2499 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 209 IPR035513 -
Dod03g2499 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 208 - -
Dod03g2499 213 Pfam Plant invertase/pectin methylesterase inhibitor 46 204 IPR006501 GO:0004857
Dod03g2499 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 208 IPR035513 -
Dod03g2499 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 17 208 IPR006501 GO:0004857
Dod03g2499 213 PANTHER 21 KDA PROTEIN-LIKE 11 208 - -
Dod03g2499 213 SMART PMEI_2 42 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2499 Dod-Chr3 56513035 56514133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2499 43 208 Carbohydrate Esterase AT1G53830 31.977 4.68e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2499 - - gmx:100305537 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2499 03 56513035 56514133 Dod03g2499 03 56513035 56514133 ECH