Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2494 ATGACGTCGTCGTCGACCCCTGCGCCACCGCATTACTCACCTGAGCCACCGCCGCCGCAGCCTCACCACGGCGACTCCCCCGGCGCCACGGGGACGTCCTCGCCGCTCACTGGCAGAGCGAAGCTCCAGAAGATTCCACCTATTCCGATCCGACGGAGCAAGAGTTCAGCGGACGAGAAAGGCCATTCGGAGGAACAACAACAACAGCAACAGCAGCGTAAAGACATGAATCAGACGATGCAGGATTGCGAATCCGTCGAATCCTCCTCCATCTTGCTTGCGTCATCTCTAGGGCTCAACCACATTCGCACGCGCTCCACCACTTCCTCTTCCCCGCTTCGCTATTCTTCCTCCGCTGCCGCACCTTCCTTCCCCAGAAACGACGCCGGCGCCGCTGAATCCAGACCTAGATCCAAACCTAAGGATACATGTGGTTGTTTAGGGGAAAAAGTTCATTGGAGTCGTCAATCCAAATCGTTGAAAGCTCATTCGCAGCTTCTTCCTGTGCTTGAGGGTAATCATGCAGCTTTCACCAAAGAAATGCAATCCCCACGTTTTCAGGCTATCTTGCGAGCAACAAGTGGCCGCAGAAAGACGCAGCCTGATATTAAAAGCTTTTCCCATGAACTCAACTCCAAAGGGGTTAGACCTTTTCCAATCTGGAAACACCGTGCGTTTGGCCACATGGAGGAAGTCATGGTGGCCATTAGAGTTAAGTTTGAGAAATTGAAGGAAGAAGTTGATTCTGACTTGGGTGCTTTTGCTGGAGATTTGGTGGGTATTCTTGAAAAGATTTCAGGGTCTCATCCTGAATGGACAGAGAGCTTAGAGGATCTATTGGTTGTTGCTCGACAATGTGCAAAGATGTCACCTTCTGAGTTTTGGACCAAATGTGAAACTATTGTTCAAAATCTAGATGACAAGCGTCAAGAATTACCGGTGGGGATCCTCAAGCAAGCTCATACACGCCTACTATTTATTCTCACTCGCTGCACCCGTCTGGTGCAATTCCACAAGGAAAGTGGCTGTGAACAAGTTCACATTCTGGGTCTTCACCAGCTCAGCGATCTTGGGGTATATCCAGAGGAACTTCTACAGGCACAGCAGAATGCCAGGGTTCCAATTAGTGGACATGACATGGCCAAGTTGCAGCTTAAAAAGTCACATGACATGGCCAAGCTGCAGCTAAAAGAGCAAGAAAAATTGATAACCAAACAAAGTCAAGCTGACCAACATGGTGGAAGTGTTGATGTGGAGGATGGTACAACCAAAAGTGTTGATTCCACTCCAAGCAGCTACAGGATGTCTTCTTGGAGAAAGCTTCCATCAGCTGCTGACAAAAAGCGTAAGGGTCAAGATGCTGGAGATTTCCCTTCCAAAGGTGAAATGGATCAGTTGCTAGTCAAAGATGAAAATGCTGAAAACTCGGACAATATGTCATGTCAACCTGACCATTCTGAGTCATCATCAAGAATGCAAAAGGCATCTTGGGGATTCTGGGGTGATCAACCAAATCTAACATATGAGGATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAATTGTGCATGTGGAAGAGCATTCTCGAATATGCACGATTGCTGATAGATGTGATCTGAAAGGCTTAACTGTAAGTGAACGGCTTGAAAGAGTTTCTGAAACTATTGAAAGGATACTGGAATCCTGGACACCGAAAAGCACCCACAGTACTGACACTCATGGAGAAAGCTTCGAGGTTGCTAGAATGTCTACATCAAGTGTGCATGAAGAGTTTAATGAGTTATCTCTTGAAAGAAATAACTTGTCTAGTAGATGCTCTGAAGACATGCTTGACTCTACTCCCGAACCAGCTGACAATACATTTGTTATGGATGATCTGCACCTTTCACATGAAATATCATGTGAAGCACATAACTGTTTAAAACCTGATCATTGCACAAAAATATCTTCAACTGGAAGTTTGACACCGAGATCACCATTGATAACACCTAGAACCAGTCAGATAGAAATGTTATTAAGTGGACGAAGAACAATATCTGAACTTGAGAGCTACGATCAGATAAATAAGCTAGTGGAAATAGCTCGGGCTGTAGCAAATGTGAACACCTGTGACTACAGTGCTTTGGAGATTATGCTTGATCGTTTAGAAGACCTGAAATATGCAATTCAGGATAGAAAAGTGGATGGACTAGTTGTGGAGACTTTTGGACGACGTATAGAGAAACTTCTGCAGGAGAAATATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGGTAGACTCATCAAATAGCATGGTTGATGAAGAGAGTTCAGTGGAAGAAGATACTGTCCGCAGCCTTCGTGCTAGCCCAATTAATCCTTATTCTAAGGACCGAACCTCTATAGAAGACTTTGAAATAATAAAACCAATAAGCAGGGGTGCATTTGGACGAGTTTTTCTTGCCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTTTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCTGAGCGAGACATCCTTATATCCGTTCGAAACCCGTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTCTATCTGGTTATGGAGTATTTAAATGGTGGAGATCTTTATTCTATGTTGGGAAATCTAGGTTGCTTAGATGAAGAAATGACTCGTGTGTACATAGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATACCTTGAATGTGATTCACAGAGACTTGAAGCCAGATAATTTGCTAATTGGGCAAGATGGTCACATCAAGCTGACTGATTTTGGACTCTCAACAGTTGGTCTTATCAACAGCACAGATGACTTATCAGCACCGTCATTTTCCACTAATGGTTTTCTAGGAGATGATGAACCAAAACCTCAGCATTCTTCTAAAAGGGAAGAACGTCAAAAGCAAGCAGTAGTTGGTACCCCAGATTATTTGGCACCAGAAATACTTCTTGGCATGGGACATGGTGCAACTGCTGATTGGTGGTCTGTAGGTGTGATACTTTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATCAACAGAGATATACCATGGCCCAAGGTGCCTGAGGAGATCAGCTCTGAAGCATATGATTTGATAAATAAATTATTGAACGAAAATCCAGTCCAAAGATTAGGTGCAACAGGAGCTACAGAGGTTAAACGCCACGCTTTCTTCAAGGATATTAATTGGGACACTTTAGCAAGGCAGAAGGCTATGTTCATACCGTCGGCCGAAGCTCTTGATACGAGTTATTTTATGAGCCGGTACATTTGGAATCCAGAGGATGAACATTGTACTGGGGGTAGTGATTTTGATGACATTAGTGAATCATGTAGCAGTGCTTCAGGAAGCGATTTATTAGATGAAGATGGTGATGAATGTGGTAGTTTAGCAGAGTTCAGTGGTCCTGCTCTTGAGGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCATCTATCAATTATGATCTGGTGATTAAGAACTCCAGAGAATCTCCCGATGACCCCAACCCTTCTGTTTCATGA 3630 0.4361 MTSSSTPAPPHYSPEPPPPQPHHGDSPGATGTSSPLTGRAKLQKIPPIPIRRSKSSADEKGHSEEQQQQQQQRKDMNQTMQDCESVESSSILLASSLGLNHIRTRSTTSSSPLRYSSSAAAPSFPRNDAGAAESRPRSKPKDTCGCLGEKVHWSRQSKSLKAHSQLLPVLEGNHAAFTKEMQSPRFQAILRATSGRRKTQPDIKSFSHELNSKGVRPFPIWKHRAFGHMEEVMVAIRVKFEKLKEEVDSDLGAFAGDLVGILEKISGSHPEWTESLEDLLVVARQCAKMSPSEFWTKCETIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFHKESGCEQVHILGLHQLSDLGVYPEELLQAQQNARVPISGHDMAKLQLKKSHDMAKLQLKEQEKLITKQSQADQHGGSVDVEDGTTKSVDSTPSSYRMSSWRKLPSAADKKRKGQDAGDFPSKGEMDQLLVKDENAENSDNMSCQPDHSESSSRMQKASWGFWGDQPNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVSERLERVSETIERILESWTPKSTHSTDTHGESFEVARMSTSSVHEEFNELSLERNNLSSRCSEDMLDSTPEPADNTFVMDDLHLSHEISCEAHNCLKPDHCTKISSTGSLTPRSPLITPRTSQIEMLLSGRRTISELESYDQINKLVEIARAVANVNTCDYSALEIMLDRLEDLKYAIQDRKVDGLVVETFGRRIEKLLQEKYISLCGQIEDEKVDSSNSMVDEESSVEEDTVRSLRASPINPYSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLGNLGCLDEEMTRVYIAEVVLALEYLHTLNVIHRDLKPDNLLIGQDGHIKLTDFGLSTVGLINSTDDLSAPSFSTNGFLGDDEPKPQHSSKREERQKQAVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIPWPKVPEEISSEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCTGGSDFDDISESCSSASGSDLLDEDGDECGSLAEFSGPALEVQYSFSNFSFKNLSQLASINYDLVIKNSRESPDDPNPSVS* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2494 1209 MobiDBLite consensus disorder prediction 441 471 - -
Dod03g2494 1209 SMART serkin_6 800 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2494 1209 ProSiteProfiles Protein kinase domain profile. 800 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2494 1209 MobiDBLite consensus disorder prediction 961 987 - -
Dod03g2494 1209 Gene3D Transferase(Phosphotransferase) domain 1 884 1106 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 9 24 - -
Dod03g2494 1209 Pfam Protein kinase domain 800 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2494 1209 MobiDBLite consensus disorder prediction 972 987 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 105 123 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 402 493 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 472 493 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 53 69 - -
Dod03g2494 1209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Dod03g2494 1209 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 37 1208 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 70 86 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 1 86 - -
Dod03g2494 1209 ProSiteProfiles AGC-kinase C-terminal domain profile. 1089 1189 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod03g2494 1209 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 1208 - -
Dod03g2494 1209 Gene3D Phosphorylase Kinase; domain 1 798 1115 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 105 144 - -
Dod03g2494 1209 SUPERFAMILY Protein kinase-like (PK-like) 782 1109 IPR011009 -
Dod03g2494 1209 CDD STKc_MAST_like 806 1093 - -
Dod03g2494 1209 MobiDBLite consensus disorder prediction 421 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2494 Dod-Chr3 56471965 56482109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2494 19 1208 AGC Kinase Gene Family AT5G62310 63.215 0.0 1468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Dod03g2494 Pkinase 4.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2494 - - gmx:100806311 1815.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2494 03 56471965 56482109 Dod03g2494 03 56471965 56482109 ECH