Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2483 ATGGGTTCTTCTAATGGTGGTGTGCCGCCGGGATTCCGATTTCACCCTACGGATGAAGAGTTGCTGCATTACTACTTGAAGAAGAAGGTGTCCTTTCAGAAGTTCGACATGGATGTTATTAGAGAGGTGGACTTGAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGCAGGATTGGATCAACTCCACAAAATGAGTGGTATTTTTTCAGTCACAAGGACAGAAAGTACCCTACAGGGTCAAGGACTAACAGAGCAACGAATGCAGGGTTTTGGAAAGCTACAGGAAGAGACAAGTGCATTAGGAACAGCTACAAGAAGATTGGAATGAGAAAAACCCTTGTGTTCTACAAGGGAAGAGCTCCTCACGGACAAAAGACTGATTGGATAATGCATGAGTACCGCCTCGAAGATGGCAATGATCCTCAAGGAAATCCTAATGAAGATGGGTGGGTGGTATGCAGGGTGTTCAAGAAGAAGAACCTGTTCAAGATTGGAAATGAAGGTGGCTCGACACACAATTCAGACCAACAACTCAACAATTCCTCCTCAGCCGCCAATGGCCGCTCCTTCATGCACAGCAGGGAAAACCAGTACTTACTAAATCAGCAACAAAACCCTAGGAACAACCCATCATCATCGTCATCAGGGTTTGAGCTCGATAAGCCCGAGCTTGGGCTCCGCTACCCCCACCTGCAAAACCCTCAATACTCACTCTTCCACTCCCAGCAACTTGTTCAAACACACAAACCGATGGTGTATGACTACTCATCGTATGCATCATCAGCACTTCCCTCAGAACCCCCACCAATCATAGCGAAGCAGCTCATGACGACAAACCCCAGGGACTGTGAGAGCGGCAGCGAGGGCTTGAGGTACCAGGTTTCGGAGCCTGGAGTGGAGGTTGGATCGTGTGAACAGGCTCAAGAGATTGGTGGCGGAGGAAGATCAGGAGAAGGAATGAACGAATGGGGTGTGCTTGACAGGCTTGTCACCTCCCATCTTGGAACCGAGGACTCAGCCAACAAAGGGGTCAGGTTTGATGATCATCATGCAGCAAATCCACAGTCTGTTCACCAGATCAACCAGCTTTCCTTGCGGGGAGAGATGGACTTTTGGGCCTATGGGAAACAATAA 1137 0.4864 MGSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPQGNPNEDGWVVCRVFKKKNLFKIGNEGGSTHNSDQQLNNSSSAANGRSFMHSRENQYLLNQQQNPRNNPSSSSSGFELDKPELGLRYPHLQNPQYSLFHSQQLVQTHKPMVYDYSSYASSALPSEPPPIIAKQLMTTNPRDCESGSEGLRYQVSEPGVEVGSCEQAQEIGGGGRSGEGMNEWGVLDRLVTSHLGTEDSANKGVRFDDHHAANPQSVHQINQLSLRGEMDFWAYGKQ* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2483 378 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Dod03g2483 378 MobiDBLite consensus disorder prediction 203 219 - -
Dod03g2483 378 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Dod03g2483 378 PANTHER PROTEIN BEARSKIN2-LIKE 5 252 IPR033519 -
Dod03g2483 378 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Dod03g2483 378 MobiDBLite consensus disorder prediction 203 222 - -
Dod03g2483 378 MobiDBLite consensus disorder prediction 167 188 - -
Dod03g2483 378 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 252 - -
Dod03g2483 378 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2483 Dod-Chr3 56380383 56384184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2483 1 372 NAC Transcription Factor Family AT1G33280 54.255 7.65e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g2483 NAM 3.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2483 - - gmx:100804181 599.742