Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2475 ATGGATAACTCATCCTGTGGCAATACGTGTGAGATGATGGAATCAAGGGAAGAGATTGTTTCTGAGTTCAAAACAGATGAAAAGCGTGAGAGTAGTTGTGCCTACAAATCTGGAAAAAAGTACTCTGTGGAAGATGATATCAATATTCTCTTCCAAGCTAGTCTTAGTTCACCACGATTGCTAAAGAGTGCTCTTAGAAGGCCAATAAAAGCCAGTTCATCTCAAACATCAAGAACTGGCATCTCAGAACCTGCAAGTTTGAAGCAGGCATTTAGAGGGTTATGCATCTCACAGGCTTCAGAAATGGCTGCTCTAAAGCGACTATCAAAGTCACCCAATTTTTCAAGAGTATCAGAGGCCGGAACTGATAAAAATTTGTACACAACAATAGTAGATGAAGGGCGAGGAGAGTTGGTGGAAATCTCCCTTGTGTCGAAGATTGAACTCTCTGATAAATTGCATAGCAATGAGACCCATGACATATCAAGTCCTCGGCATTCAGCTACTTTTGTTGATGCAACAAACCCAAAAACAATGGCAACTAGATTAGCATACCGAAATAAAATTCTTCCTCTTACTCCAGATGTTCGCAGTGAGAAGCTAGTCAACAAACTTGGAAAACAAATACTTGAAAATTTGTCATCAGTTGTCTATGCAAGTGGTAAAGTGCTGGAGGTCAAACCTAGAATGGTCCCTACTTCCTTTAGCAAAGACTTTCCCAGTTCTTCAACTCCAGATAAGGGGATGGAAGCAAAGTTAAATTCTTTAGTTTCTCTGCTGCCTAGTCCCAGCACTAGTAATGGAGTGGATAAATCCACCAGAAAGCATACATATTTGGAAAAGCCAATATTCAAGGACAAGACCTTCCTTAACATGAAAGTAAAGCAAGATTTATGTTCTTCTTCCATTCAATGTACCAGAAAAAATGGCAATGATTTGGCTTCTAGTGCATGTAATTTGAACATGGTGACCGGCAATTCTAATTTAAAGAATGAAATGAAAGAAAATGAGAAACTTTCCCCTAGCCATTCAAATCATAGCATCAAAGTCAACTCAGTTGATGTTGGCAAGGATACAGCCAAAGCTGGGTTTAGTTTTACTGGCAATAAGAAAATGAAGATTTTGGTGACAAAAACCAATGAAAAATCCATATCAAAGGATGAGTTCTCACAAAATTCAGAAAGTAGTATTTGTGAGTATAGTAGTTGTACCAGCAATAGCGAGGAGAGCAGTCTGAGTGGTTCCAACTGCAGAGGCTGCAGACCTCACATGTCAAAACATTTGAGATGGGAAGCAATTCATGCTATTCAGCAACAACATGGTAATTTAAGTTTGAGGCACTTCAAGCTACTCAGAAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTACAGAACTAGTTGGTACAAGTTGCCATTTTGCACTAAAAGTGATGGACAATGAATTTTTGGCAAGTGGAAAGAAAGTGTCCAGGGCCCAAACTGAAAAAGAAATCCTGCAGATGCTAGATCATCCGTTTCTTCCAACAGTTTATGCCCATATTGCAACAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGAGGGGATCTGCATGTGCTGCGCCAAAGGCAATCCTATAGGAGTTTCTCCGAACAAGCAGCCAGGTTTTATACTGCTGAAGTTCTCCTTGCCCTGGAGTATTTGCACATGCTAGGAGTTGTATACCGAAACCTAAAGCCTGAAAATATCTTGGTAAGAGAAGATGGTCACATTATGCTAACAGATTTTGACTTGTCACTCAGATGTTCTGTAAATGCAATGTTAGTGAAGTCATCTTCACCAGGTGTGGAACCATCAAAGAAAATGTCCAGTTCTTGTTCCGAGGCTAGCCGCATACACCATTTCTGTCTCCAACCAAATTGGCAAGTCCCCTGCTTTACTCCTATTCTGTCATCGGCCAAAGCAAAATCTCGAAAAATGAAGGCTGATATAGCTGCTCAGGTTGGTCCACTGCCACAGCTTGTGGTGGAGCCTACCAGTGCTCATTCTACCTCCTTGGTTGGAACCTATGAATACCTTGCTCCAGAGATCATCAAAGGTGAGGGTCATGGAAGTGCTGTAGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGAACATGCAAATGAAGATACATTAGCCAATGTTATGTCACAAAACCTTAAGTTCCCAGATACTCCTATTGTTAGTTTTCGAGCAAGAGATTTGATCAGAAGGTTGTTGATAAAAGACCCTAAAAATCGATTAGGTTCTGTAAAAGGTGCTACTGAAATAAAGCAGCATTCCTTCTTTGAAGGCCTTAACTGGGCTCTGATAAGGTGTGCACCACCACCTGAGCTCCCCAGATTCCACAATTCAGGAACTAGTGCAACATCTCTGGCTTCACACAAGGAGAATGTCAATGATTTAGATGATGCAGAAGAAGAATGTGAGCAGTGTGACCTATTTTAG 2505 0.408 MDNSSCGNTCEMMESREEIVSEFKTDEKRESSCAYKSGKKYSVEDDINILFQASLSSPRLLKSALRRPIKASSSQTSRTGISEPASLKQAFRGLCISQASEMAALKRLSKSPNFSRVSEAGTDKNLYTTIVDEGRGELVEISLVSKIELSDKLHSNETHDISSPRHSATFVDATNPKTMATRLAYRNKILPLTPDVRSEKLVNKLGKQILENLSSVVYASGKVLEVKPRMVPTSFSKDFPSSSTPDKGMEAKLNSLVSLLPSPSTSNGVDKSTRKHTYLEKPIFKDKTFLNMKVKQDLCSSSIQCTRKNGNDLASSACNLNMVTGNSNLKNEMKENEKLSPSHSNHSIKVNSVDVGKDTAKAGFSFTGNKKMKILVTKTNEKSISKDEFSQNSESSICEYSSCTSNSEESSLSGSNCRGCRPHMSKHLRWEAIHAIQQQHGNLSLRHFKLLRRLGCGDIGTVYLTELVGTSCHFALKVMDNEFLASGKKVSRAQTEKEILQMLDHPFLPTVYAHIATDKLSCLVMEYCPGGDLHVLRQRQSYRSFSEQAARFYTAEVLLALEYLHMLGVVYRNLKPENILVREDGHIMLTDFDLSLRCSVNAMLVKSSSPGVEPSKKMSSSCSEASRIHHFCLQPNWQVPCFTPILSSAKAKSRKMKADIAAQVGPLPQLVVEPTSAHSTSLVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKEHANEDTLANVMSQNLKFPDTPIVSFRARDLIRRLLIKDPKNRLGSVKGATEIKQHSFFEGLNWALIRCAPPPELPRFHNSGTSATSLASHKENVNDLDDAEEECEQCDLF* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2475 834 Pfam Protein kinase domain 678 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2475 834 Pfam Protein kinase domain 449 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2475 834 SUPERFAMILY Protein kinase-like (PK-like) 425 810 IPR011009 -
Dod03g2475 834 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 826 - -
Dod03g2475 834 CDD STKc_phototropin_like 446 800 - -
Dod03g2475 834 Gene3D Transferase(Phosphotransferase) domain 1 528 597 - -
Dod03g2475 834 PANTHER FLIPPASE KINASE 1-RELATED 7 826 - -
Dod03g2475 834 ProSiteProfiles Protein kinase domain profile. 448 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2475 834 Gene3D Transferase(Phosphotransferase) domain 1 677 800 - -
Dod03g2475 834 Gene3D Phosphorylase Kinase; domain 1 446 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2475 Dod-Chr3 56316188 56321131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2475 5 812 AGC Kinase Gene Family AT3G52890 43.939 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod03g2475 Pkinase 7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2475 - - gmx:100789339 1082.01