Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2472 ATGGCCAAGAGTCCCCTTCTGTTCTACCTTTTCCAGTTCTTGCCAATGCTGTTACTCACTTCCTACATCATTTTGCGGCCGTGTGTGTCTCTAACCTTGGAAGCACAAGCTCTTCTTGAGTTCAAGAACCATTTGAATGACTCCTTGAATTACTTGGGTTCATGGAATGAATCATTGTCTGCATGTGAGTTTCATGGAATCACCTGTGATCCATTTTCTGGGAAAGTCACAGAAATCTCACTTGAAAATAAGTCCCTCTCCGGTGTCATTTCCCCATCACTCTCAGTTCTGCAGAGCCTGCAAGTGCTGTCACTGGCATCAAATTTGGTTTCTGGAAAGCTTCCATCAGAAATAGGTAGCTGCACAACCCTCAGAGTGTTGAACCTAACAGGAAATGTGATGGTTGGAACCATCCCAGACTTGTCTGGGCTGAGAAACCTTCAGGTTCTTGACCTTTCAGCAAACTACTTCTCTGGCAGAATTCCCAGCTGGGTGGGGAATTTGACTGGACTAGTTTCACTGGGCCTTGGGGAAAATGGGTACACTGAGGGTGAGATTCCAGAGACTCTTGGAAATCTGAAGAACTTGACTTGGCTCTACCTTGGTGGTTCCCATTTGATAGGAGAGATTCCAGAATCAATATATGAAATGAGGGCATTGGAGACACTGGACATTTCAAGGAACAGGATCTCTGGCAAACTCTCAAGATCAATTTCCAAGTTAAAAAATCTTGGCAAGATTGAGCTCTTCTCAAACAACTTGACAGGAGAAATCCCAGCTGAGCTTGCAAACCTCACCAATCTGCAAGAGATTGACATTTCTGCAAACCATCTCTATGGTAGGGTGCCAGAGGAAATTGGTAACATGAAGAACTTGACTGTTTTTCAACTGTATGATAACCACTTGTCTGGAGAACTTCCTGCTGGATTTGGGGATATGCAACATCTTGTTGGATTCTCAGTTTATAGAAACAGCTTCACTGGGACGATTCCGGAAAACCTCGGCCGGTTTTCGCCGCTTGAGAGTATTGACATATCTGAGAATCAATTTTCAGGTGATTTCCCAAAGTTCTTGTGTGAAAGCAGGAAGTTGGAATTATTGCTTGCATTGCAGAACAATTTCTCTGGGAATTTTCCTGAGACTTATGTCACGTGCAAATCTCTATTGAGATTAAGGATTAGTAGGAACTACTTATCTGGGAAAATTCCGGATGAGGTGTGGGCACTCCCAGATGTAAAAATAATTGATTTGGGTTACAATGAATTCAGTGGTGAGATATCTTCAGAAATTGGGTTTTCGACCAACCTAAATGAGTTAGTTTTGACTAACAACAGGTTTTCTGGTAAGCTGCCATCAGAGCTTGGCAAGCTGGTGAACTTGGAGAAGCTTTACTTGAACAATAATAGTTTCTCGGGTGAAATACCACCCGGATTGGGATCTCTGAAGCAATTATCTACTTTGCATCTAGAAGAGAATTCATTGAGTGGATCAATACCCACAGAACTGGGTGATTGTGCATGGCTGGTGGACTTGAATCTTGCTTGGAATTCTCTATCTGGAGACATCCCCCAGTCAATTTCACTTATGACCTCGTTGAACTCTCTTAATCTATCTGGAAACAAACTTACAGGTTCTATTCCAGATAATTTAGAGACAATGAAGCTTAGCTCCGTGGATTTTTCTGAAAACCAGTTTTCTGGGAGAGTTCCACCTGGTCTTCTGATTATTGGAGGAGAACAAGCTTTTCTTGGAAACAAGGGGCTGTGTGTTGAGGAAAAATCTAAGCCTTCCATGAATTCTGATTTGAAGATTTGTGCCGAAAGTCATGGTCAGAAAAGGGTCTACGCTGACAAATTTTTCTTGTTATGTTTTATTGGATCTATCTTTGTCATCGTTTTAGCTGTGTTGCTGCTTTTGAATCGTAGAAACCTCAAGCATATTATTGTGGATAAAAACTTAGAAGGTCGAGAGGAAGTAAGTCAAAAATGGAAACTTGCATCTTTCCACCAAGTGGATATTGATGTGGATGAAATATGTAAATTGAATGATGATAATTTAATAGGCAGTGGTAGTACAGGAAAGGTTTATCGGGTGGAGTTGAGGAAAAACCGTGGCACGGTGGCAGTAAAGAAACTAGGCAAAGGAGATAATGTGAAGATTTTAGCTGCAGAGATGGAGATTTTGGGGAAGATTAGGCATAGAAATATACTTAAGCTATATGCTTGTTTACTAAAAGGAGGGTCCAATTATTTAGTGTTTGAGTACATGCCAAATGGTAATCTTTTTCGAGCTCTTCACAGACAGATTAAAGATGGGAAGCCAGACTTGGATTGGAACCAGAGGTACAAAATTGCCTTGGGTGCTGCAAAGGGCGTTTCCTATTTGCACCATGATTGTTCTCCACCTATTATTCACAGGGATATAAAATCCAGCAACATCTTGCTTGACGAGGATTATGAGTCAAAAGTAGCTGATTTTGGTTTTGCAAGGTTGGCAGAAAAATCTAATAAACAGTTGGGTTATAGTTGTGTAGCTGGCACACATGGTTATATTGCTCCAGAGCTCGCTTATACACTTGACATCGATGAAAAGAGTGATGTTTATAGCTTTGGAGTGGTGCTATTAGAGTTAGTGTGTGGCAGAGAACCCATTGAAGAGGATTATGGAGATGCCAAGGATATTGTTTATTGGGTTTTGAATAATCTCAACGACAGTGAAAGTGTTCTCAGCATTCTTGATAAGAAGTTGGCATCCAAATCCGTAAATGGTATGATAAAAGTCTTGAAGATTGCTATCAAGTGCACCCAAAAGCTTCCATCTCTGCGCCCTACAATGAGAGAGGTTGTCAACATGCTTGTTGATGCTGAACCTTCCACATGGAAATCTCCTCAAAGTGGTCTTGACAAAGATGAAGGGGCTCCTTTCACAAGTAGTGATTTTCTCTCTTAA 2949 0.4127 MAKSPLLFYLFQFLPMLLLTSYIILRPCVSLTLEAQALLEFKNHLNDSLNYLGSWNESLSACEFHGITCDPFSGKVTEISLENKSLSGVISPSLSVLQSLQVLSLASNLVSGKLPSEIGSCTTLRVLNLTGNVMVGTIPDLSGLRNLQVLDLSANYFSGRIPSWVGNLTGLVSLGLGENGYTEGEIPETLGNLKNLTWLYLGGSHLIGEIPESIYEMRALETLDISRNRISGKLSRSISKLKNLGKIELFSNNLTGEIPAELANLTNLQEIDISANHLYGRVPEEIGNMKNLTVFQLYDNHLSGELPAGFGDMQHLVGFSVYRNSFTGTIPENLGRFSPLESIDISENQFSGDFPKFLCESRKLELLLALQNNFSGNFPETYVTCKSLLRLRISRNYLSGKIPDEVWALPDVKIIDLGYNEFSGEISSEIGFSTNLNELVLTNNRFSGKLPSELGKLVNLEKLYLNNNSFSGEIPPGLGSLKQLSTLHLEENSLSGSIPTELGDCAWLVDLNLAWNSLSGDIPQSISLMTSLNSLNLSGNKLTGSIPDNLETMKLSSVDFSENQFSGRVPPGLLIIGGEQAFLGNKGLCVEEKSKPSMNSDLKICAESHGQKRVYADKFFLLCFIGSIFVIVLAVLLLLNRRNLKHIIVDKNLEGREEVSQKWKLASFHQVDIDVDEICKLNDDNLIGSGSTGKVYRVELRKNRGTVAVKKLGKGDNVKILAAEMEILGKIRHRNILKLYACLLKGGSNYLVFEYMPNGNLFRALHRQIKDGKPDLDWNQRYKIALGAAKGVSYLHHDCSPPIIHRDIKSSNILLDEDYESKVADFGFARLAEKSNKQLGYSCVAGTHGYIAPELAYTLDIDEKSDVYSFGVVLLELVCGREPIEEDYGDAKDIVYWVLNNLNDSESVLSILDKKLASKSVNGMIKVLKIAIKCTQKLPSLRPTMREVVNMLVDAEPSTWKSPQSGLDKDEGAPFTSSDFLS* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2472 982 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Dod03g2472 982 MobiDBLite consensus disorder prediction 958 982 - -
Dod03g2472 982 Gene3D Ribonuclease Inhibitor 318 599 IPR032675 -
Dod03g2472 982 Pfam Leucine Rich Repeat 459 481 IPR001611 GO:0005515
Dod03g2472 982 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Dod03g2472 982 ProSiteProfiles Leucine-rich repeat profile. 531 554 IPR001611 GO:0005515
Dod03g2472 982 CDD STKc_IRAK 687 952 - -
Dod03g2472 982 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 12 965 - -
Dod03g2472 982 Pfam Leucine rich repeat 145 206 IPR001611 GO:0005515
Dod03g2472 982 Pfam Leucine rich repeat 219 278 IPR001611 GO:0005515
Dod03g2472 982 SMART serkin_6 681 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2472 982 ProSitePatterns Protein kinases ATP-binding region signature. 687 711 IPR017441 GO:0005524
Dod03g2472 982 Gene3D Phosphorylase Kinase; domain 1 680 759 - -
Dod03g2472 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Dod03g2472 982 Gene3D Transferase(Phosphotransferase) domain 1 760 968 - -
Dod03g2472 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 965 - -
Dod03g2472 982 SUPERFAMILY L domain-like 58 308 - -
Dod03g2472 982 ProSiteProfiles Protein kinase domain profile. 681 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2472 982 SUPERFAMILY RNI-like 247 568 - -
Dod03g2472 982 SMART LRR_typ_2 457 480 IPR003591 -
Dod03g2472 982 SMART LRR_typ_2 481 505 IPR003591 -
Dod03g2472 982 SMART LRR_typ_2 144 168 IPR003591 -
Dod03g2472 982 SMART LRR_typ_2 217 241 IPR003591 -
Dod03g2472 982 SMART LRR_typ_2 97 121 IPR003591 -
Dod03g2472 982 SMART LRR_typ_2 529 553 IPR003591 -
Dod03g2472 982 SMART LRR_typ_2 265 289 IPR003591 -
Dod03g2472 982 Pfam Protein kinase domain 683 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2472 982 SUPERFAMILY Protein kinase-like (PK-like) 680 952 IPR011009 -
Dod03g2472 982 Gene3D Ribonuclease Inhibitor 181 243 IPR032675 -
Dod03g2472 982 Gene3D Ribonuclease Inhibitor 244 314 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2472 Dod-Chr3 56278140 56281944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2472 23 962 Receptor kinase-like Gene Family AT1G72180 56.059 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g2472 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2472 - - gmx:100789704 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2472 03 56278140 56281944 Dod03g2472 03 56278140 56281944 ECH