Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2471 ATGGCTTTTCTCCTTGACCACTCCTTCTGCCACTTCTTTATTTTCCTGTACTTCCTCTCTTCTCTTTCTATCATAAATTCACTTTCAACAGTTTCAATTTCTGAGACATCCAACCAGACATTTATTTGTGCCTTACTGCAGCATCCAAACCAACAAGGACAATCTAACCTTAACTGTACTAGCTTTCCTCCTGGTATTGGTCTTCAACGTCATCCTAATATCTCATATTCTGAGATTGTGGGTGGCAATGGATTTCTATGTGCACTAAGGCCACCCTCTTCTTCTATTTCCATCATGGGGTGTTGGAGATTCTCTGCCAATGCTACTAATGTTCCCTATAAGCGTATCTACCGTGGACCCGTTATAGAAAACATTGATGCTGGCAACTCCCATGTCTGTGGCCTTTTAAATAATGGGAACAATGGCCTCGAGTGCTGGCAGTGGCCTGGCTTCAACAATTCAAACATGGGCAGGAACATGTCAAGCATTGCTGTGGGAGAGAATTTTGTTTGTGGCTTATCACAATCAGGCAACGTTACATGCAGCGGCAATGATACCAGAGTCGTTGGGAATAGGCCTCTTGGCCGCTACTCTTCAATTGCAGCTGGGTTTAGGTATGCTTGTGCTATCTCTCTTGATGGTAGCTTGGATTGCTGGGGTGACATGAAGGGTCAGAAACCACAGGGTAGTTTCATTGGTTTGGCCTTGGGAGAGAACCGAAGTTGTGCTCTTAGGTCCAATGAAACAGTGGCTTGTTGGGGATCAGATGATTTCAGCATCCCACAGAGATTTCAGGGGACTTTTTTTGCAGCAATTGTAGCAAAGCGAAGTGTTTTCTGTGGAGTTGTGTCTTCTAATTTGTCTTTGGTCTGTTGGGGTAGTAAGATTCTTGAGGCAAATGACAAGGTGTTTGACCATGTCCTCCCTGGACCTTGTAGAAGTAAATGTCCATGCGGACCCGTGACAAATTCTGCCGCATTATGTGACTCTCAAGGCATGTCCGTTTGCAAGCCTTGTTCCCAAGATAATGAACCTGAGTCTCCATTGCAACCACAACCATCGCCGACTTCTCCACCACCCGAAACCACAGAAAGTGGTTGGAGCAACAAGATGGTGGCATTCCTAGTGGTTGGATGTGTTGGTTGCAGTTCCTTGTTGGCTGTCTTTGCTTTCTTCCTTTACTGGCACTGCAAAGGCCGAAAAGGGCGTGTCCATGACTCTGGCAGATTGGACGAGTCAGGGACCGCCTCACCAAGCCAACCACCGGAAGAAGCAGCTCAAACTGTCCGTGGAGTCCTGGAGAAGCGATTGAGCCATGTGATCAGCACGGGAACAGGGAGCCATTTGGAGGAATTCTCCCTGCAAGCGCTGCTTGAAGCCACCAACAACTTCTCAGAGGACAAAAGGATTGGGATAGGCAGCTTTGGCTCAGTGTATCATGCCACACTTCAAGACGGCAAAGAAGTTGCCATAAAGAGAGCTGAAGTCTCTCCAAACTCCCCATACAATGCAACATTGGGTGCCACAAAAAGGCAAGAAGACAAGGACAATGCATTTGTCAACGAGCTTGAGAACCTCTCAAGGCTCCACCACAAGAACTTGGTCCGCTTAATAGGTTTCTACGAGGACATGAATGAACGCATCCTGGTGTACGAGTACATGAACAATGGGAGCCTAAACGACCATCTCCACAAGCTCCAAAGCTCTGCACTCATGTCATGGCCAATGCGCATCAAGGTAGCGCTCGATGCAGCAAGGGGAATAGAGTACCTCCACCAATATGCCACCCCGCCAATAATCCACCGTGACATAAAGTCATCAAACATATTACTGGATGCAAGGTGGACAGCAAAAGTGTCTGATTTTGGGCTCTCATTGATGGGTCCTGAAGATGAGCAGTCACACCTCTCACTCCTAGCAGCTGGCACTGTTGGATACATGGACCCTGAATACTACAGGCTCCAACTCTTGACAACAAAGAGCGACGTGTACAGCTTCGGGGTTGTTCTGCTGGAAATGCTATCCGGGCACAAAGCCATACACAAGAACGAAAATGGGGTGCCAAGAAATGTGGTGGATTTTGTGTTGCCTTATATTTTTCAGGACGAGATTCATAGGGTGTTGGACCCAAGAGTGCCACCACCAACACCGTTTGAGATAGAGGCAGTGGTGTATGTCGGTTATTTGGCGGCAGATTGTGTGCGCCCGGAAGGTAGAGATAGACCAACTATGACTGAGGTTGTAAATTGCTTGGAAAGAGCGTTGGGTGCGTGTTTGGCCCAACCACAATTCTCAAGGTCCACGACTTCTTCTTCAGATTAA 2322 0.4746 MAFLLDHSFCHFFIFLYFLSSLSIINSLSTVSISETSNQTFICALLQHPNQQGQSNLNCTSFPPGIGLQRHPNISYSEIVGGNGFLCALRPPSSSISIMGCWRFSANATNVPYKRIYRGPVIENIDAGNSHVCGLLNNGNNGLECWQWPGFNNSNMGRNMSSIAVGENFVCGLSQSGNVTCSGNDTRVVGNRPLGRYSSIAAGFRYACAISLDGSLDCWGDMKGQKPQGSFIGLALGENRSCALRSNETVACWGSDDFSIPQRFQGTFFAAIVAKRSVFCGVVSSNLSLVCWGSKILEANDKVFDHVLPGPCRSKCPCGPVTNSAALCDSQGMSVCKPCSQDNEPESPLQPQPSPTSPPPETTESGWSNKMVAFLVVGCVGCSSLLAVFAFFLYWHCKGRKGRVHDSGRLDESGTASPSQPPEEAAQTVRGVLEKRLSHVISTGTGSHLEEFSLQALLEATNNFSEDKRIGIGSFGSVYHATLQDGKEVAIKRAEVSPNSPYNATLGATKRQEDKDNAFVNELENLSRLHHKNLVRLIGFYEDMNERILVYEYMNNGSLNDHLHKLQSSALMSWPMRIKVALDAARGIEYLHQYATPPIIHRDIKSSNILLDARWTAKVSDFGLSLMGPEDEQSHLSLLAAGTVGYMDPEYYRLQLLTTKSDVYSFGVVLLEMLSGHKAIHKNENGVPRNVVDFVLPYIFQDEIHRVLDPRVPPPTPFEIEAVVYVGYLAADCVRPEGRDRPTMTEVVNCLERALGACLAQPQFSRSTTSSSD* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2471 773 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Dod03g2471 773 SUPERFAMILY RCC1/BLIP-II 113 295 IPR009091 -
Dod03g2471 773 Pfam Protein kinase domain 465 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2471 773 ProSiteProfiles Protein kinase domain profile. 464 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2471 773 MobiDBLite consensus disorder prediction 342 364 - -
Dod03g2471 773 SMART serkin_6 464 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2471 773 MobiDBLite consensus disorder prediction 403 428 - -
Dod03g2471 773 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 23 763 IPR044815 GO:0004674
Dod03g2471 773 Gene3D - 74 308 IPR009091 -
Dod03g2471 773 SUPERFAMILY Protein kinase-like (PK-like) 441 752 IPR011009 -
Dod03g2471 773 Gene3D Phosphorylase Kinase; domain 1 438 553 - -
Dod03g2471 773 CDD STKc_IRAK 470 753 - -
Dod03g2471 773 PANTHER OJ000114_01.11 PROTEIN 23 763 - -
Dod03g2471 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Dod03g2471 773 Gene3D Transferase(Phosphotransferase) domain 1 554 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2471 Dod-Chr3 56271800 56274765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2471 27 769 Receptor kinase-like Gene Family AT5G47850 51.172 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod03g2471 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2471 - - pvu:PHAVU_011G003100g 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2471 03 56271800 56274765 Dod03g2471 03 56271800 56274765 ECH