Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2464 ATGTGTTTTAGGTCTAGCCTCCCTCTTGCAAGGCATGATGGCATGACAACCAGGGCCACTAGCGGGGGGCTCTCTGCTCGGAAGATTTACTTCCACTTACTGGTTCGTGGTTGTCATCGGGATATCAAGCCTCAAAATATATTAGTCAATCCACATACCCACCAGGTTAAATTATGTGACTTCGGAAGTGCAAAAGTCTTGGTAAAAGGTGAACCAAATATATCATACATATGTTCTAGATATTACAGAGCACCTGACCTTATTTTTGGACCAACTGAATATACCACTGCTATTGACATTTGGTCTGTTGGTTGCGTATTGGCTGAGCTTCTTCTTGGACAGCCTTTGTTCCCAGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAAATGAATTCAGCCAGTAATGCCAGCTGA 420 0.4357 MCFRSSLPLARHDGMTTRATSGGLSARKIYFHLLVRGCHRDIKPQNILVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPDLIFGPTEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKMNSASNAS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2464 139 SMART serkin_6 9 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2464 139 SUPERFAMILY Protein kinase-like (PK-like) 37 132 IPR011009 -
Dod03g2464 139 Pfam Protein kinase domain 38 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2464 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2464 139 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 30 132 - -
Dod03g2464 139 Gene3D Transferase(Phosphotransferase) domain 1 29 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2464 Dod-Chr3 56136135 56138476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2464 6 132 Core Cell Cycle Gene Families AT3G48750 38.129 1.13e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dod03g2464 Pkinase 4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2464 K00924 - pop:18098492 197.978