Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2426 ATGGAGCGACAGAACCGTACTGTCACTCACAACCACCACCAACCCACCAACACTACCAACATGAAAATAATGTTACTGGAGCCAACAAAGGCTGTGCCTGTTGTCGTGGAAGCAGACCCCGATTCAGAGGTGGTGGTTAAGAGGGGCAGAGGGAGGCCCCAGAAGTATGACGCCAACGGAAGACTTTTAAGTCCCACATTGGTGTCGCCTCCGCCGGGGTTCTTCACCCCTGACCCTTTTGAGAGCCCCGCCGTTAAGAGGGACAGAGGAAGGCCTCGTGATTCTGGGAAGCTACAGATTCTGGCTTCCATTGGTGGGTATGTTGTAGAAACAGCTGGTGGAAGTTTCACTCCTCATGTGGTGATTGTGAATATTGGGGAGGATGTGGTTAGCAAGATATTATCTTTTTTCCAAAACGGCCCTCGAGCTGTTTGCATTCTTTCTGCTACTGGTCCTGTGTCAAGTGTTGTCATTCGCCAACCAAGTGTTTTGGGTGGTATTTTGAAATATGAGGGCCGCTTTGAGATTTTATCTTTATCTGGATCATGTACCTACACTAATGGCACTGGTGGTGCACATCGCAAAGAGGGCATGCTAAGTGTTTCACTGGCCAAATCTGATGGGAGGGTCTTTGGAGGTGGCATTGAGAGCTCATTGATTGCAGCTGGCCCTATTCAACTTGTAATGGCCACTTTCAAGCAAAACATCGGCAAGCAAATCAAGGGGAGGCACTCATCTCAACCTTCTGATGCTCGCAATGTGCCGGATTATCAACGCTCAGAAAGGGGTCGCCTCAAAGTTCCTAAGTTAGAAGGAGAACAGAGTTGCCATTCACCAACAACAACACCAGCACCACTTGTGCAAAAGGCAACAACAAATGAAGTGCATGATGGTGTCACAATTGCAACAACTAATGGAGGACCAGAAGATGTCATTTCTGCAGCAGCAACAACAAACAATGGCATATATAGCTGA 975 0.481 MERQNRTVTHNHHQPTNTTNMKIMLLEPTKAVPVVVEADPDSEVVVKRGRGRPQKYDANGRLLSPTLVSPPPGFFTPDPFESPAVKRDRGRPRDSGKLQILASIGGYVVETAGGSFTPHVVIVNIGEDVVSKILSFFQNGPRAVCILSATGPVSSVVIRQPSVLGGILKYEGRFEILSLSGSCTYTNGTGGAHRKEGMLSVSLAKSDGRVFGGGIESSLIAAGPIQLVMATFKQNIGKQIKGRHSSQPSDARNVPDYQRSERGRLKVPKLEGEQSCHSPTTTPAPLVQKATTNEVHDGVTIATTNGGPEDVISAAATTNNGIYS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2426 324 MobiDBLite consensus disorder prediction 255 271 - -
Dod03g2426 324 MobiDBLite consensus disorder prediction 274 293 - -
Dod03g2426 324 MobiDBLite consensus disorder prediction 239 254 - -
Dod03g2426 324 PANTHER DUF296 DOMAIN PROTEIN 3 297 - -
Dod03g2426 324 ProSiteProfiles PPC domain profile profile. 113 258 IPR005175 -
Dod03g2426 324 CDD DUF296 117 232 IPR005175 -
Dod03g2426 324 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 238 - -
Dod03g2426 324 MobiDBLite consensus disorder prediction 239 293 - -
Dod03g2426 324 Gene3D - 118 246 - -
Dod03g2426 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 297 IPR039605 GO:0003680
Dod03g2426 324 MobiDBLite consensus disorder prediction 73 95 - -
Dod03g2426 324 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 233 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2426 Dod-Chr3 55655077 55665515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2426 46 300 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 40.072 2.63e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2426 - - aip:107632385 328.561