Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2415 ATGAAGAGGAACCCTCGGAAAGTAAAATGGACCAAGGCATATAGGCGAGTGCATGGAAAGGATATGACTCAGGATTCAACCTTCGAGTTTGAGAGAAAGAGAAACAGGCCGGAGAGATATGACAGGAATCTTGCTGAGAATGTCCTCAAGGCGATTCCAAAGATTGATAAGATCAAAGTCAGCAGGGAGGAGAGGCACCATAAGAATAGGATGAAGGGCAAGAAACAGAAGCTACAGATGGAGGCAGCCAAGGAGTTGGAGCAGGGCATCAGTTTGGTCAAAGCTCCTTCTGTGCTGCAAAAGGATCCGTCTCTCACTTTACCAAAGATCAAAGTCGGGGTTTCCCAACAACAATCAGAGGACAACCTTCTCATGGAGGAGTGA 384 0.4688 MKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIKVSREERHHKNRMKGKKQKLQMEAAKELEQGISLVKAPSVLQKDPSLTLPKIKVGVSQQQSEDNLLMEE* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2415 127 Coils Coil 68 88 - -
Dod03g2415 127 PANTHER 60S RIBOSOMAL PROTEIN L24 1 127 IPR000988 -
Dod03g2415 127 Gene3D Ribosomal protein L24e 1 27 IPR038630 -
Dod03g2415 127 Pfam Ribosomal protein L24e 1 24 IPR000988 -
Dod03g2415 127 PANTHER BNAA04G10330D PROTEIN 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2415 Dod-Chr3 55431525 55433888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2415 1 127 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 58.268 2.14e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2415 K02896 - gmx:100793564 244.202