Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2408 ATGATGGATGCTGGATTACTTAATGAAGTCTATGAAATTTACAATTTGGATGCAGATTATACTAGAGGTTTGCGGCAAGCTATTGGTGTCCGTGAATTTGAGTCTCTTCTTAGAACCTCTGTTGTTGAAGACATCTATAACAGAGAGAAGGAATTTATTGAGGGGTCTGGCATAGAAAAGGGTGTGAAATTGTTTGATGGTAATCTGATGGAGTGGTTGAAATCTTCCTCTGATACTAAATCTGTAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGGTTAATACCCGGAGACTTGTTCGACGTCAGAAGAGGATGCTTAGTCGATTGCAAACACTGTTTGGTTGGAACATACATTACGTGGATTCCACAGAATCAATATCAAGCAAATCAGATGATGTATGGACCGATCAAGTGGTTGAATCTGCCGTGAAGATAGTTAGTTCATTCCTGTGTGAGAATGGAAGCTTCTCACCCACCTGTGGGATGTCAAATGACACTAGGATGAAAATAATCCAAAGGGATCTCTGGACTCAATACATATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGATTGCATGAATGGGAGCAACACAAACGAGGTCGCGGGCACAGGAAACGCGTTTCTAGTCTCAAGAGCAAGGGACAAGATCTTAGTAACTTGGAGCCAAAGCTGGAATACTCTGTCTCTGAGTCCAAATAG 705 0.4142 MMDAGLLNEVYEIYNLDADYTRGLRQAIGVREFESLLRTSVVEDIYNREKEFIEGSGIEKGVKLFDGNLMEWLKSSSDTKSVILLEEAIEKVKVNTRRLVRRQKRMLSRLQTLFGWNIHYVDSTESISSKSDDVWTDQVVESAVKIVSSFLCENGSFSPTCGMSNDTRMKIIQRDLWTQYICKACGDRVLRGLHEWEQHKRGRGHRKRVSSLKSKGQDLSNLEPKLEYSVSESK* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2408 234 MobiDBLite consensus disorder prediction 204 234 - -
Dod03g2408 234 PANTHER TRNA DIMETHYLALLYLTRANSFERASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 2 41 - -
Dod03g2408 234 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 42 164 IPR039657 -
Dod03g2408 234 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 2 41 IPR039657 -
Dod03g2408 234 MobiDBLite consensus disorder prediction 214 234 - -
Dod03g2408 234 Gene3D Classic Zinc Finger 176 219 - -
Dod03g2408 234 PANTHER TRNA DIMETHYLALLYLTRANSFERASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 42 164 - -
Dod03g2408 234 SUPERFAMILY beta-beta-alpha zinc fingers 151 215 IPR036236 -
Dod03g2408 234 Pfam IPP transferase 1 105 - -
Dod03g2408 234 Gene3D - 1 175 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2408 Dod-Chr3 55320468 55322308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2408 1 214 C2H2 Transcription Factor Family AT2G27760 52.074 3.22e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2408 K00791 - gmx:100792690 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2408 03 55320468 55322308 Dod03g2408 03 55320468 55322308 ECH