Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2407 ATGATTAACAACAGGGATAACACTGTAACTTCAAACCCTAGCGACGCAGGAACAGAGAAGCCGAAGGTGGTGGTGATAACGGGCCCCACTGCCTCCGGGAAGTCGAAGCTGGCCGTCGATTTGGGCTCCCACTTCCCCATCGAAGTGATCAACGCCGATTCCATGCAGGTCTACCGTGGACTCGATGTTCTCACCAACAAACTCCCTCTCCCCCAACAACACGGAGTGCTGCACCATCTTTTGGGTACCGTTAGCCCGAACGTCGAATTCACTGCTAAAGCGTTTCGGGATTCTGCTATTCCAATCATAGATGAGATATTGGCTCGAAATCACTTGCCTGTTATAGTTGGGGGTACAAATTACTATACCCAGGCTCTTGTCAGTCCGTTTCTTCTAGATGATTCAGCAGAGGATATGAATGAATACTGTTCAGGTACCGCACAGTCTGATGACGGCTTTCTTGCTGAAAATGGCAGTTCAAATGATAGTTATGACCTGCTCAATGATATTGATCCAGTTGCTGCAAATAGAATCCATCCAAATAACCATAGAAAGATCAATCAATATCTTAGTTTGTATGCACGCACCGGTGTTCTTCCTAGCAAAGTTTTTCAAGGAAAGGCAGCAGAGGGCAGAAGTGGGGTCAAGTTGATAACTTAA 660 0.4652 MINNRDNTVTSNPSDAGTEKPKVVVITGPTASGKSKLAVDLGSHFPIEVINADSMQVYRGLDVLTNKLPLPQQHGVLHHLLGTVSPNVEFTAKAFRDSAIPIIDEILARNHLPVIVGGTNYYTQALVSPFLLDDSAEDMNEYCSGTAQSDDGFLAENGSSNDSYDLLNDIDPVAANRIHPNNHRKINQYLSLYARTGVLPSKVFQGKAAEGRSGVKLIT* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2407 219 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 19 203 - -
Dod03g2407 219 TIGRFAM miaA: tRNA dimethylallyltransferase 23 209 IPR018022 GO:0008033
Dod03g2407 219 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g2407 219 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 19 203 IPR039657 -
Dod03g2407 219 Gene3D - 16 155 IPR027417 -
Dod03g2407 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 128 IPR027417 -
Dod03g2407 219 MobiDBLite consensus disorder prediction 1 17 - -
Dod03g2407 219 Pfam IPP transferase 56 206 - -
Dod03g2407 219 Gene3D - 156 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2407 Dod-Chr3 55317711 55320390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2407 12 210 C2H2 Transcription Factor Family AT2G27760 62.857 1.37e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2407 K00791 - gmx:100792690 329.331