Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2389 ATGCAGCCTGACATCACAGGACCGGGTGTGAATATTTTGGCAGCATGGTCTCCAGTGGCAATCGGACAGATAGTTGAACAAAGATCTGTCAACTATAATATCTATTCAGGAACATCAATGTCTTGCCCACACCTTTCTGCTGTTGCAGCAATTATAAAGTCTCACCATCCTTCTTGGAGTCCTGCAGCCATAATGTCTGCAATAATGACTACAGCAACAATTATGGACAACGCACATCGCCTTATAAGAAGAGATCCAAATGATACTCAAGCCACACCTTTTGACTGTGGATCTGGACATGTTAATCCAGTTGCATCACTAAATCCTGGACTGGTGTATGATTTTGATGCACAAGATATTCTCAATTTTCTGTGCAGCAATGGGGCAACCCCAGCACAGCTTAAGAACCTCACTGGGGTACTAACTCAATGTCAAACTCCAATAGCTTCCTACAACTTCAACTACCCTTCAATTGGTGTGTCCAAGCTGAGTGGAAGTTTGTCCGTTAATCGTACAGTTACCTACTATGGCAAGGAACTGACAGCGTATGTTGCAAGTGTTGAGAATCCAGATGGTGTGGATGTTGCAGTTACACCAGCAGTATTAACTTTTGGGAAAGAAGGGGAGAAGGCAACTTTCAGGATTGATTTCAAGCCATTCAAGAATAGCAATGTCTCAGTGAAGCAAGCAGCAGCAGCACTCCACCATTACAGTAAAAGCTTCAGAGGCTTCTCGGCCATGCTTACTCCAGAGCAAGCTAATCAACTTGCAGCCGCAGCCCCAGGAGTTCCAGCATCTAATGCAAGTGTCTCTCATCCAACTATGCAGCCTGACATCACAGGACCGGGTGTGAATATTTTGGCAGCATGGTCTCCAGTGGCAACCGAAGACACAGTTGAACAAAGATCTGTCAACTATAACATCATTTCAGGAACATCAATGTCTTGCCCACACCTTTCTGCTGTTGCAGCAATTATAAAGTCTCACTATCCTTCTTGGAGTCCTGCAGCCATAATGTCTGCAATAATGACAACAGCAACAGTTATGGACAACACACATCACCTTATAGGAAGAGATCCAAATGATACTTCAACCACACCTTTTGACTATGGATCAGGACATGTTAACCCAGTTGCATCACTAAATCCTGGACTAGTATATGATTTTGATGCACAAGATGTTCTCAATTTTCTGTGCAGCACTGGGGCAACCCCAGCACAGCTTAAGAACCTCACTGGGGTAATAACTCAATGTCAGAGATATCCTACTCCAACATCTTCCTACAACTTCAATTACCCTTCAATTGGTGTGTCCAAATTGAGTGGAAGCTTATCTGTTTACCGTACGGTTACCTACTATGGCAAGGAACCAACAAGGTATGTTGCAAGTGTTGAGAATCCAGATGGTGTGAGTGTTGTAGTCACACCAGCAGAGTTGACTTTTGGGAAAGAAGGGGAGAAGGCAACTTTTAGGATTCATTTCAAGCCTTTCACGAATAGCAATGGTAACTTTGTATTTGGTGCCTTGACATGGAACAATGGCATACAAAGGGTTAGGAGTCCTATTGGTCTCAATGTACTCTCTACCTAA 1590 0.4358 MQPDITGPGVNILAAWSPVAIGQIVEQRSVNYNIYSGTSMSCPHLSAVAAIIKSHHPSWSPAAIMSAIMTTATIMDNAHRLIRRDPNDTQATPFDCGSGHVNPVASLNPGLVYDFDAQDILNFLCSNGATPAQLKNLTGVLTQCQTPIASYNFNYPSIGVSKLSGSLSVNRTVTYYGKELTAYVASVENPDGVDVAVTPAVLTFGKEGEKATFRIDFKPFKNSNVSVKQAAAALHHYSKSFRGFSAMLTPEQANQLAAAAPGVPASNASVSHPTMQPDITGPGVNILAAWSPVATEDTVEQRSVNYNIISGTSMSCPHLSAVAAIIKSHYPSWSPAAIMSAIMTTATVMDNTHHLIGRDPNDTSTTPFDYGSGHVNPVASLNPGLVYDFDAQDVLNFLCSTGATPAQLKNLTGVITQCQRYPTPTSSYNFNYPSIGVSKLSGSLSVYRTVTYYGKEPTRYVASVENPDGVSVVVTPAELTFGKEGEKATFRIHFKPFTNSNGNFVFGALTWNNGIQRVRSPIGLNVLST* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2389 529 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 221 IPR045051 -
Dod03g2389 529 Gene3D - 216 256 - -
Dod03g2389 529 SUPERFAMILY Subtilisin-like 254 387 IPR036852 GO:0004252|GO:0006508
Dod03g2389 529 Pfam Fibronectin type-III domain 429 522 IPR041469 -
Dod03g2389 529 Pfam Fibronectin type-III domain 152 230 IPR041469 -
Dod03g2389 529 Pfam Subtilase family 265 351 IPR000209 GO:0006508|GO:0008236
Dod03g2389 529 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 272 524 IPR045051 -
Dod03g2389 529 ProSiteProfiles Serine proteases, subtilase domain profile. 1 107 - -
Dod03g2389 529 PANTHER LOW QUALITY PROTEIN: SUBTILISIN-LIKE PROTEASE SBT5.3 272 524 - -
Dod03g2389 529 Gene3D Peptidase S8/S53 domain 1 119 IPR036852 GO:0004252|GO:0006508
Dod03g2389 529 Gene3D Peptidase S8/S53 domain 257 393 IPR036852 GO:0004252|GO:0006508
Dod03g2389 529 Pfam Subtilase family 2 76 IPR000209 GO:0006508|GO:0008236
Dod03g2389 529 PANTHER LOW QUALITY PROTEIN: SUBTILISIN-LIKE PROTEASE SBT5.3 2 221 - -
Dod03g2389 529 Gene3D - 398 526 - -
Dod03g2389 529 SUPERFAMILY Subtilisin-like 2 111 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2389 Dod-Chr3 54949082 54958438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2389 246 522 Subtilisin-like Serine Gene Family AT2G04160 44.406 5.85e-60 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2389 - - pvu:PHAVU_011G092600g 414.075