Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2379 ATGGCGGAAGAACACAGGTGCCAAGCTCCACGGCTCTGCGCCAACAACTGCGGATTCTTCGGATGCCCAGCCATGCAGGACCTCTGCTCAAAATGCTACCGCGATCTCCAGCTCAAGGAGCAGCAATCTTCCTCCGCAAAATTGGTCCTCAACAAAACCCTAGCTCCTCCTCCTCCTCCACAGGCGGTTCCTTCTTCGCTGACGGAACCGGTCGCAGCTCCTTGTTCTTCTTCATCATCATCAACATCTTCATCTTCGTTGGTTGACGTGCCGCCAAGCGCCGCCGCAGCGGGGGAAAGGATACTGCCGGTGGTTGTGGCGAATCGGTGCGCGACGTGCAGGAAGCGCGTGGGGCTGACGGGGTTCAAGTGCAGGTGTGGGTTGACGCTGTGTGGGTCGCATCGGTACCCGGAAGGGCATGGGTGCGGGTTCGATTTCAAGGGGATGGGGAGGGACCAGATCGCCAAGGCCAATCCTGTGGTGAAGGCCGAGAAGCTTCACAAGATCTGA 510 0.5882 MAEEHRCQAPRLCANNCGFFGCPAMQDLCSKCYRDLQLKEQQSSSAKLVLNKTLAPPPPPQAVPSSLTEPVAAPCSSSSSSTSSSSLVDVPPSAAAAGERILPVVVANRCATCRKRVGLTGFKCRCGLTLCGSHRYPEGHGCGFDFKGMGRDQIAKANPVVKAEKLHKI* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2379 169 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 169 - -
Dod03g2379 169 Gene3D - 1 55 - -
Dod03g2379 169 SUPERFAMILY AN1-like Zinc finger 106 164 IPR035896 -
Dod03g2379 169 ProSiteProfiles Zinc finger AN1-type profile. 104 150 IPR000058 GO:0008270
Dod03g2379 169 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Dod03g2379 169 MobiDBLite consensus disorder prediction 51 89 - -
Dod03g2379 169 Gene3D - 76 165 IPR035896 -
Dod03g2379 169 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 169 - -
Dod03g2379 169 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Dod03g2379 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 55 - -
Dod03g2379 169 SMART AN1_Zf_4 110 147 IPR000058 GO:0008270
Dod03g2379 169 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Dod03g2379 169 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Dod03g2379 169 Pfam AN1-like Zinc finger 110 146 IPR000058 GO:0008270
Dod03g2379 169 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2379 Dod-Chr3 54803413 54804964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2379 1 169 C2H2 Transcription Factor Family AT3G52800 49.432 1.05e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2379 - - egr:104433995 228.794