Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2365 ATGTACCATCACCACCAACATCAAGGAAAGAACATCCATTCTTCTTCAAGAATGCCAATCTCTTCTGAGAGGCACATGTTCCTTCAAACTGGAAATGGGTCTGGTGATTCTGGACTTGTGCTGTCCACTGATGCCAAGCCTAGATTGAAATGGACACCAGACCTTCATGCAAGGTTCATAGAAGCAGTTCATCAGTTAGGTGGAGCTGACAAGGCAACTCCAAAAACAGTGATGAAACTCATGGGGATTCCAGGACTTACCTTATATCATCTGAAGAGTCATCTTCAGAAATACAGATTGAGCAAGAATCTGCATGGACAAAGTAACAATGTGACTCAAAAAATAAATCCAGCTGCAACTACGGGAGAAAGACCCTCTGAAAGCAATGGAACTCACATGAACAACTTAAACATTGGATCTCATGAGCCTAACAAAGACTTGCACATAAGTGAGGCACTGCAGATGCAGATAGAGGTGCAAAGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTGCAGATGAGGATAGAGGCACAAGGAAAATACCTGCAGGCTGTGCTGGAGAAAGCTCAGGAAACACTTGGAAGACAGAATTTGGGAATGGTAGGACTTGAAACTGCTAAAGTTCAACTCTCAGAGCTGGTGTCCAAAGTGTCCTCCCAGTGCCTGAACTCAGCTTTCTCAGAAGTGAAGGAGTTACAAGGATTCAGCCCTCAGCAAACACAAACCAACCATCCAAACAATGACTGCTCCATGGACAGTTGCCTCACATCATGCTGTGAGGGACCACATAAAGATCAGCAAGAGATACAAAATGGGGGGATGTGCTTAAGACCCTTCAATGGCCATGCATTCTTGGAAAGAAAAGAAGTCATAGAGGCTCCAAATTCCAACATAGACTCTGATGTAAGATGGTGTGATCAAATGAATAAGAAGAACACCTTTCTCAACCCATTAGGGAAGAGTGCAGAAAGAAGGAGCTATGGTGTAGAAAGAAGTCCAAGCAACTTATCAATGAGCATTGGACTTGAAGGGGACACTGATCATGGAAGCAAGACTGAGAAAATCTCTCAGGATTATAGGTTGCCTTCTTACTTTGCTGCAACAAGACTGGACCTGAACGCACGCGATCAAGATCAAAGTGAAGCTGCAACAACGAGTTGTAAACAATTGGACCTGAATGGATTTAGTTGGAGCTGA 1203 0.4356 MYHHHQHQGKNIHSSSRMPISSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVHQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTQKINPAATTGERPSESNGTHMNNLNIGSHEPNKDLHISEALQMQIEVQRRLNEQLEVQRHLQMRIEAQGKYLQAVLEKAQETLGRQNLGMVGLETAKVQLSELVSKVSSQCLNSAFSEVKELQGFSPQQTQTNHPNNDCSMDSCLTSCCEGPHKDQQEIQNGGMCLRPFNGHAFLERKEVIEAPNSNIDSDVRWCDQMNKKNTFLNPLGKSAERRSYGVERSPSNLSMSIGLEGDTDHGSKTEKISQDYRLPSYFAATRLDLNARDQDQSEAATTSCKQLDLNGFSWS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2365 400 Gene3D - 45 103 - -
Dod03g2365 400 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Dod03g2365 400 Coils Coil 150 170 - -
Dod03g2365 400 MobiDBLite consensus disorder prediction 117 141 - -
Dod03g2365 400 MobiDBLite consensus disorder prediction 325 356 - -
Dod03g2365 400 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Dod03g2365 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 355 IPR044848 GO:0003700
Dod03g2365 400 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Dod03g2365 400 Pfam MYB-CC type transfactor, LHEQLE motif 148 194 IPR025756 -
Dod03g2365 400 PANTHER MYB-RELATED PROTEIN 2 353 400 - -
Dod03g2365 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 353 400 IPR044848 GO:0003700
Dod03g2365 400 PANTHER MYB-RELATED PROTEIN 2 4 355 - -
Dod03g2365 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Dod03g2365 400 MobiDBLite consensus disorder prediction 117 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2365 Dod-Chr3 54605876 54608861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2365 78 400 G2-like Transcription Factor Family AT3G04030 52.584 2.97e-98 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod03g2365 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2365 - - gmx:100810396 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1484 10 35200857 35203723 Dod03g2365 03 54605876 54608861 PCT