Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2344 ATGGAAGATCTCCCACCTGGCTTTCGTTTCTTCCCAACTGAAGAAGAGCTAGTAGGCTTCTATCTACACAACAAGCTTGAAGGGCAAATAAACGCCATGGACAGAGTTATCCCAGTCATTGACATCAATGGCGTAGAGCCTTGGAGCCTTCCAACACTTGCAGGGGACCTTTGTCGTGGGGACACAGAACAATGGTTCTTCTTTTCACCGGGCCAAGCGAGAGAGGCCAGGGGAGGTAGGCCCAACAGAACCACGGCTAGTGGGTACTGGAAGGCTACGGGGTCCCCTGGCTATGTTTACTCTTCTGATAATAGAGTCATTGGGGTGAAGAAAACCATGGTGTTCTACAAAGGGAGAGCCCCCAGTGGAAGAAAAACCAAGTGGAAGATGAATGAGTACAGAGCCATCCAAGTCTCTCACCAATCCGGAACTGCCACTGCCGAACCTCAGCTGAGGCGGGAATTCAGCTTGTGTCGGATTTATGTCATATCCGGAAGCTTTCGAGCATTTGATAGACGACCATCAGAGAATCCAAGAGCACTAGAGTCACGGCAACATGAGATTGATCAGAACAGAGCTGGTGCCTCATTTGCTTATTCAAGGGTTGATGCATCAACTTCGTCTGAAACTACCCACATAGGAGTAGACCATAGTGCATATCTGCTAGAAGCTGGAGGCTCAAGTGGCACAAATTGGAATGTAAATTATAATGATGACAATAATAATAATGGGGTCCAACTTCAAGAAACGATGTGGGAATGGGGGCAAATCAATTGGCTCTAA 783 0.4764 MEDLPPGFRFFPTEEELVGFYLHNKLEGQINAMDRVIPVIDINGVEPWSLPTLAGDLCRGDTEQWFFFSPGQAREARGGRPNRTTASGYWKATGSPGYVYSSDNRVIGVKKTMVFYKGRAPSGRKTKWKMNEYRAIQVSHQSGTATAEPQLRREFSLCRIYVISGSFRAFDRRPSENPRALESRQHEIDQNRAGASFAYSRVDASTSSETTHIGVDHSAYLLEAGGSSGTNWNVNYNDDNNNNGVQLQETMWEWGQINWL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2344 260 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 259 - -
Dod03g2344 260 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Dod03g2344 260 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Dod03g2344 260 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 259 - -
Dod03g2344 260 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Dod03g2344 260 SUPERFAMILY NAC domain 3 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2344 Dod-Chr3 54305501 54308352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2344 2 259 NAC Transcription Factor Family AT5G22380 52.672 1.12e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g2344 NAM 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2344 - - cam:101497878 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1468 10 35022058 35023763 Dod03g2344 03 54305501 54308352 PCT