Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2329 ATGACCATATCCCTGTACAATTTGCTCCTTCCTCCTTACTTCCCCTCTCAACAAAGTCATCCATCCATGCTTCATGCATTGGCTCAAGGGCTATGGAACAAGAGAATTGACCCTCATCATTTCGATACTTTTCCGTACTGCCTTGAAGGAGGTTTGTTTCCTCAGGAATGGGTTGCTTCTGTTCACCCTTCGATGGGCCACCGCGGTTATCCGTGGAGTGAAAGGGGCAAAAGGAAACTGAAAGATTGCTGGTTTTGTCCCACTGACCATGAGTTGATCTCATATTACCTCAACAACAAGTTGGATGGCCATCAACACACTGTTCTAATCATTTCCGAGCTTCAATTTTGTAGCTTTGAGCCTTGGGATTTACCTTCAGCCAAATCATTCCTTCAATCAGATAACGAGTGGTTCTTCTTCTCTCTGCGTGGAAGAAAGTACCCAAATGGCTCACAAAGCAAGAGGGCAACAAAATATGTTTTAGCGCAATGTGAAGTCAGAGCTTCTTCAACTCAAATGCATGTGGTGAATTCACATGATGGAAGAAACTCTGCTATCTCAGAAGCTGGTGCTGATCAAAGGGAATTGTGTGAGCATAATAAAGGGGTTGGACGTAGTTCCAAGAGGAGCAGCTGTAGTTTTGACTCTCCTTCAGCAGCGGATCAAATTGATGCTGCATCTGAACCCAATCATAGACCAGCCATTTACGCTACTTTGACGGAATCTTCCAGCTATCTAAAGGGGATGGATGAAGAAGATTGTTATGCTGAAATATTGAAGGATGATATCATCATACTAGACGAATCTTCGCTCACACAAGTGACTCACATGGGATATCAGGATTTGCCGCACATGCATCCTTGCCAAGGCACAGCTCCTCGAGGAATAAGATTGAGGCGTTCTTCAATGCACTCATCAAAGACTACCTTATTTGCAATAATGACCAACCGTTTGGTGGTTTTTTCTTTCTTAGTTTTCACTTTGATTGCTCTCCCTTTGCCTTTATGGGGGTCTCAAACAAGTGAAATGTTTTGGCAAATTTAG 1044 0.4339 MTISLYNLLLPPYFPSQQSHPSMLHALAQGLWNKRIDPHHFDTFPYCLEGGLFPQEWVASVHPSMGHRGYPWSERGKRKLKDCWFCPTDHELISYYLNNKLDGHQHTVLIISELQFCSFEPWDLPSAKSFLQSDNEWFFFSLRGRKYPNGSQSKRATKYVLAQCEVRASSTQMHVVNSHDGRNSAISEAGADQRELCEHNKGVGRSSKRSSCSFDSPSAADQIDAASEPNHRPAIYATLTESSSYLKGMDEEDCYAEILKDDIIILDESSLTQVTHMGYQDLPHMHPCQGTAPRGIRLRRSSMHSSKTTLFAIMTNRLVVFSFLVFTLIALPLPLWGSQTSEMFWQI* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2329 347 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 85 158 - -
Dod03g2329 347 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 183 312 - -
Dod03g2329 347 MobiDBLite consensus disorder prediction 206 220 - -
Dod03g2329 347 MobiDBLite consensus disorder prediction 199 227 - -
Dod03g2329 347 ProSiteProfiles NAC domain profile. 79 242 IPR003441 GO:0003677|GO:0006355
Dod03g2329 347 Gene3D NAC domain 88 187 IPR036093 GO:0003677|GO:0006355
Dod03g2329 347 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 85 158 - -
Dod03g2329 347 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 183 312 - -
Dod03g2329 347 SUPERFAMILY NAC domain 84 158 IPR036093 GO:0003677|GO:0006355
Dod03g2329 347 Pfam No apical meristem (NAM) protein 83 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2329 Dod-Chr3 54132174 54138405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2329 85 271 NAC Transcription Factor Family AT2G27300 36.073 5.64e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g2329 NAM 2.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2329 - - gsj:114373381 146.747