Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2321 ATGTCTTCCAAGAAGAAAAACCTGTTCAAAACTGTATTCACAGCAAACGGAAGCTGTGGCTGTGGCAGCACAAAAGCCTGTGAAGTTCATGAACCAACCCCAAAACCCAAAATCTCCATTCATCCCAAAAGCACAACATACCCTAGTAGCATGGCTTCTTCTTTCACTACTTCACACAACTGTGGCTTCTCCGTGGAGGACGAAGATTCCGTCACCACAATCTCCGAATTCGAAACCGCTCGTAACCAGAACAATAGTAGTCCCAATAACAATCTGGTAGAGAAACGAAGCCCACTCATGGACTCTTTGGCGGTCGAGAAGGACTCTTCGGACCCATATCGCGATTTCAGGCACTCCATGCTCCAGATGATCTTTGAGAAGGAGATTGAATCGGAAGATGATCTTCAAGATCTTCTTCAGTGCTTTCTTCAGCTGAATGCACCACATCATCACCTTGTCATCGTTAAGGCCTTCAATGAGATCTGTGAAGAGGCGTTCCCTGAAAAGGTTAGTTCTATTGGAAGATCTCCAATATCTCAGGGGAATCACATCACCATTCGAAAGAGTAGTCAGTGA 576 0.4531 MSSKKKNLFKTVFTANGSCGCGSTKACEVHEPTPKPKISIHPKSTTYPSSMASSFTTSHNCGFSVEDEDSVTTISEFETARNQNNSSPNNNLVEKRSPLMDSLAVEKDSSDPYRDFRHSMLQMIFEKEIESEDDLQDLLQCFLQLNAPHHHLVIVKAFNEICEEAFPEKVSSIGRSPISQGNHITIRKSSQ* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2321 191 Pfam Transcriptional repressor, ovate 109 164 IPR006458 -
Dod03g2321 191 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Dod03g2321 191 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 175 - -
Dod03g2321 191 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Dod03g2321 191 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 175 IPR038933 GO:0045892
Dod03g2321 191 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 104 162 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2321 Dod-Chr3 53975331 53976293 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod03g2321 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2321 - - ccaj:109799084 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1450 10 34825760 34826336 Dod03g2321 03 53975331 53976293 PCT