Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2312 ATGGCTTATGGTGCTACAAACCCAAATGATCTCAAAGTCCTGAATGATTTCAGAAAAGGGTTGAAGAATCTAGAGCTTCTGAAATGGCCAGATAATGGAGATGACCCTTGTGGCCCTCCTTCATGGCCTTATGTGTTCTGCAAGGGAGACAGGGTCACGCAGATTCAGTCTAAGAATCTTGGCCTTAAAGGTTTCAGTGGATTGTCCAAATTGGAATATGCTTTCTTGGATTACAATCAGTTTGAAGCAATCCCTTCTGATTTCTTCAAAGGACTCACCAGCATCAGGATCTTGACTTTGGAAGAAAACCCATTTCTAAATGCAAGTACCGGTTGGTCATTTCCTATGGACTTGAAAGAATCAGTGCAATTGACCAATCTTTCTCTGGTTAGATGTAATTTGGTTGGACCATTGCCTGATTTCCTAGGCAATTTACCTTCTCTTCTGAATGTGAGGCTTTCATTGAACAACCTTTCTGGTGGCATTCCAGCTAGTTTTGGCCAATCTTCAATCCAGGTTTTGTGGTTGAATAATCAACAAGGTAGTATGATGACAGGTCCTATAGATGTTATTGCTTCCATGACTTTCTCGAGACAGCTTTGGCTGCATGGAAACAAGTTCACTGGGGAAATTCCACAGAACATTGGAAATCTAGTTTCCCTGCAGGAGCTAAACCTCAACGGCAATCAACTTGTTGGCTTGATTCCAGAAACCTTGGCAAACATGGACCTTGACATGGTGGATTTAAGCAATAACATGTTAATGGGTCCAATACCAAAGTTTATGGCAGCCAGAGTAACTTATAAGTCCAATTTCTTTTGTCAAATTTCACCAGGGCTTGCATGTGCCCCTGAAGTTACTGCACTACTTGATTTTCTACATAATCTGGATTACCCATCTTCTCTCAGTTCTAAATGGTCAGGTAATGAACCATGTAAAGATCAATGGTTTGGATTGAGCTGCAATCAGAACTCTGTATCTATGATCAATTTGCCTAGACAAAAGCTCAATGGTACACTGAGTCCCTCAATTTCTAAGTTAGGTTCACTCCTTGAAATTAGGCTTGCAGGGAATAATATAAATGGTGAAGTCCCAAGTAATTTTACTGAGTTGAAATCTTTGAGGTTGTTGGATTTAAGTGATAACAATGTTGAGCCTCCATTGCCAAACTTTCATGACGGTGTGAAAGTTAATACTGATGGCAACCCTCTTTTTGCTAATCAAACCGCAAGTAGCCCCCCACCTATTAGCATTCCATCACCTTCAAGGGCACCACCGCCTTCACCGCATAACCTGACAGCACCACCACCACTGCTAGCGCCAGCTTCTATACAATCACCTCCAATATCACTACCACCACCTTCCCATATTCCCCCTTCCAAACCAAATAATGACTCCAAAAGTTTCAAAACAACAGCAATAGTTGCTGGAATTGCAATCTTTGCATTTGTTGGTATTTTGGTCATTTCCTTTTTCCTGTGTTGTTTGAAGAAGAAAAGGGCCTCATTGCATGTTCCTAGCTCTTTTGTGGCTCATACTCAAGATCCTTCTGATCCAGACAAGATGGTTAAATTTGCAGTTTCAGATAGCACCACTGAAACCAAATTAACAAAGACAAGGATTAGTTCTGTAAGTGACATCTGCAGTGAAACTGAAAACATTCTTGTGGTTGAGGCCGGCAACCTTGTCATATCAGCTCAAGTTCTAAGCAAGGTCACCAAGAATTTCGCTTCAGAGAATGAGCTTGGCCGTGGTGGGTTTGGAACCGTTTACAAGGGTGAACTAGGAGACGGGACAAAGATAGCAGTGAAGAGAATGGAGCATGGAGCTATTAGCAGTAAGGGACTGGATGAGTTTCAGGCTGAAATAGCCGTTCTTTCCAAGGTCCGCCATAGACATTTGGTATCACTACTGGGCTATTCCATTGAAGGCAATGAAAGACTCTTGGTTTATGAATATATGCCTCTTGGTGCTCTAAGCAAGCATCTTTTTGATTGGAAAAGCTTGAACTTGGAGCCTTTGTCTTGGTCACAGCGGCTTGCAATAGCACTTGATGTTGCCAGAGGGATGGAATACCTTCACGGTCTTGCTCGCCAGACCTTCATCCATCGAGATCTCAAGTCTTCGAACATTCTACTGGGGGGTGATTTCCGGGCAAAAGTTTCAGATTTTGGCCTGGTGAAACTTGCCCCAGATGGTAAAAAGTCTGTGGCAACAAAACTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAGATCACCACTAAAGTTGATGTATTCAGCTATGGTGTGGTGTTGATGGAACTTCTGACTGGATTAATGGCTCTTGACGAGAATCGGCCTGAAGAAAACCGGTACTTGGCCGAATGGTTTTGGCAAATCAAATCAAGCAAAGAAAAGCTCATGGCCGCCATTGATCATGCCCTGGAAGCAAATGAAGAGATTTTTGAGAGTATCTACATTGTAGCTGAACTTGCTGGACATTGCACTGCTAGGGAAGCAAATCGCAGGCCTGACATGAGTCATGCAGTCAATGTACTGTCAGCATTGGTAGAGAAATGGCGGCCGGTTGATGAAGAACTCGATTGCAGCTCTGGCATTGACTGCAGTCAACCGCTTCCACAGATGTTGAAAATTTGGAAGGAAGCAGAAGGCAAAGAGTTAGGCTATTCTAGTCTTGAAGACAGTAAAGGAAGTATACCAACTAGGCCTGCTGGTTTTGCAGACTCTTTCACTTCTTCTGATGCTCGATGA 2769 0.4301 MAYGATNPNDLKVLNDFRKGLKNLELLKWPDNGDDPCGPPSWPYVFCKGDRVTQIQSKNLGLKGFSGLSKLEYAFLDYNQFEAIPSDFFKGLTSIRILTLEENPFLNASTGWSFPMDLKESVQLTNLSLVRCNLVGPLPDFLGNLPSLLNVRLSLNNLSGGIPASFGQSSIQVLWLNNQQGSMMTGPIDVIASMTFSRQLWLHGNKFTGEIPQNIGNLVSLQELNLNGNQLVGLIPETLANMDLDMVDLSNNMLMGPIPKFMAARVTYKSNFFCQISPGLACAPEVTALLDFLHNLDYPSSLSSKWSGNEPCKDQWFGLSCNQNSVSMINLPRQKLNGTLSPSISKLGSLLEIRLAGNNINGEVPSNFTELKSLRLLDLSDNNVEPPLPNFHDGVKVNTDGNPLFANQTASSPPPISIPSPSRAPPPSPHNLTAPPPLLAPASIQSPPISLPPPSHIPPSKPNNDSKSFKTTAIVAGIAIFAFVGILVISFFLCCLKKKRASLHVPSSFVAHTQDPSDPDKMVKFAVSDSTTETKLTKTRISSVSDICSETENILVVEAGNLVISAQVLSKVTKNFASENELGRGGFGTVYKGELGDGTKIAVKRMEHGAISSKGLDEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSKHLFDWKSLNLEPLSWSQRLAIALDVARGMEYLHGLARQTFIHRDLKSSNILLGGDFRAKVSDFGLVKLAPDGKKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDENRPEENRYLAEWFWQIKSSKEKLMAAIDHALEANEEIFESIYIVAELAGHCTAREANRRPDMSHAVNVLSALVEKWRPVDEELDCSSGIDCSQPLPQMLKIWKEAEGKELGYSSLEDSKGSIPTRPAGFADSFTSSDAR* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2312 922 Gene3D Transferase(Phosphotransferase) domain 1 654 869 - -
Dod03g2312 922 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2312 922 MobiDBLite consensus disorder prediction 414 460 - -
Dod03g2312 922 SUPERFAMILY RNI-like 16 386 - -
Dod03g2312 922 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Dod03g2312 922 MobiDBLite consensus disorder prediction 896 922 - -
Dod03g2312 922 Pfam Leucine rich repeat N-terminal domain 284 322 IPR013210 -
Dod03g2312 922 Pfam Leucine rich repeat N-terminal domain 8 47 IPR013210 -
Dod03g2312 922 PANTHER OSJNBA0070M12.3 PROTEIN 2 64 - -
Dod03g2312 922 PANTHER OSJNBA0070M12.3 PROTEIN 63 922 - -
Dod03g2312 922 SMART serkin_6 576 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2312 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Dod03g2312 922 SUPERFAMILY Protein kinase-like (PK-like) 558 852 IPR011009 -
Dod03g2312 922 Gene3D Phosphorylase Kinase; domain 1 537 653 - -
Dod03g2312 922 SMART LRR_typ_2 218 241 IPR003591 -
Dod03g2312 922 SMART LRR_typ_2 371 393 IPR003591 -
Dod03g2312 922 SMART LRR_typ_2 347 370 IPR003591 -
Dod03g2312 922 SMART LRR_typ_2 68 91 IPR003591 -
Dod03g2312 922 Gene3D Ribonuclease Inhibitor 8 279 IPR032675 -
Dod03g2312 922 CDD STKc_IRAK 582 852 - -
Dod03g2312 922 Gene3D Ribonuclease Inhibitor 284 409 IPR032675 -
Dod03g2312 922 PANTHER OSJNBA0070M12.3 PROTEIN 2 64 - -
Dod03g2312 922 PANTHER OSJNBA0070M12.3 PROTEIN 63 922 - -
Dod03g2312 922 Pfam Protein tyrosine and serine/threonine kinase 579 851 IPR001245 GO:0004672|GO:0006468
Dod03g2312 922 MobiDBLite consensus disorder prediction 388 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2312 Dod-Chr3 53782680 53786296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2312 55 867 Receptor kinase-like Gene Family AT1G55610 29.863 2.91e-75 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dod03g2312 PK_Tyr_Ser-Thr 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2312 - - cam:101505581 1275