Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2305 ATGGCAACGTACTTTCATGGCAGCAACGACAACAACAACACTTCAGAAATCCAACCCTCCGCTGAAGGGTTGCAGACACTTTACCTTATGAACCCAAACTACGTACCCTTCTCTGACTCGGCGCAGAATCCAACACCCAGCATGTTCTTCCTGAATCCCAACAACAACACTAGTACCAGTACTAGTGTCACTCATCGCGGCCACACGCTCAACCTGGCTAGTCTCTCTCACGCGCCGCCACAACATCACCAACTTGTTGGGGTTACCATTCCGGCTTCAAACATCATCGGTGGTGGCGCCAACGCCGAGGAAATTCCCAGCTTCCATGGCTTTGCTATGGCGGCGGCCGGAGCTCCTCGTGTCCACTACAACTTGTGGGGTTCGATCGTTGATCAAACCTCTTCTTCTGTTGCTGCAGCAGCGGCGGTTACAACAGTGGCAGCAGCCTCGTCTAGTAATTCGGGGCATGTTGCTACTGTAGCAGGCGCTGCAGCAACCGATATTGGGTTCCATGGGCCTAGCCATCAGCAGGGGTTGTCACTCAGTCTTTCCTCTCAACAACCGAGTTATCGGTCGTTTTCCGGCGAGATGGATGCCGTGTCTCCGGCTAGCTGTGGCGGCGGCTGCGGCGATGTGAGGGTGGTGGGGAATAGTAATGGGGTTTCAAGTATGCATAGTGTTGTTTTGGGGTCCAAGTATTTGAAAGCGGCACAGGAGCTTCTTGATGAAGTTGTTAATGTGGGCAACAAGGGAATCTCCATATTAGAGGGGGCTTCTAACAGTAATAAAGGGAAGATGAAAGGGAATATTGTTGAATCGACTTCTGGTGTTGGTGATGGATCGAGCGGTGGAGGAGAAAGCAGTGGTGCGGCTAACAAGCAAGGAGGGGAACTCAGCACAGCACAAAGACAAGAACTTCAGATGAAGAAGTCCAAGCTTGTTAACATGCTTGATGAGGTGGAGCAAAGGTACCGACAGTATCACCACCAAATGCAAGTTGTGGTATCATCGTTTGAGCAGGCAGCAGGTTTTGGGGCTGCAAGATGTTACACAGCCCTTGCACTGAAGACCATCTCGAAGCAATTCCGGTGCCTTAAGGACGCAATCTCTTCACAGATCAGGGCAACGAGCAAGACACTGGGAGAAGATGATTGCTTGGGAGCTAAGTTAGAGGGTTCGAGGCTTAGGTTCGTTGATCACCACCTCCGACAACAAAGGGCACTTCAGCAGCTTGGAATGATCCAGCACAGTAATGCTTGGAGGCCCCAGAGAGGCTTGCCTGAACGAGCTGTTTCCGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCTTACCCTAAGGACTCCGATAAGGTTATGCTGGCAAAACAAACTGGACTTACTCGGAGCCAGGTGTCTAACTGGTTTATTAATGCTCGAGTTCGGCTATGGAAACCAATGGTTGAAGAGATGTACTTGGAAGAAGTCAAGGATCAGGACCAGAACAATGGCTCCTCCTCTCAGGATAACACAAACAGGTCAAAAGAATCAAACAATGAGTTATGGTCAACATCTAACACTGCGCAGGAACAAGCTGCCATTAGACTTGACCAAATAAATGTTCTCCAATCAAAAGCAGAAAGCTTCAACAACATCAACAACCACCAAAACACTTCTCCAACTGATCAGATCTCAAACTCCAACAACAATTCAATGTCAACATCTCCCATGGGAGGAGGACACCCTGGTAATTTCCTTCTTGCTGCAGGGTCTTCTGACATGCAAAGGAGTCCAAACAAGCCAAGGAGTTCTCAGATTCGTAACTCTCAAAGTAGTATTCTTTCAATGGACATGGAAATGAAGCCTAATGGAGAGACTCATAGCGAAGCCAATAATAACACAAAGTTTGGAATTGAAAGGAACCATGGTGGTCGTGGTGGTTACGGAGCATTCTCCATGGAGGACATTGGAAGGTTTAATGTCACTGATCATCATCAGCAGCAGCAACAATTGGCTCCAAGGTTCCATGGGAATGGTGTTTCTCTCACACTAGGACTTCCCCCAAGTGAGAACCTTCCTTTATCTGGAACTCAACATGGGTTTCTCTCACAGAATATGCATTTGGGAGGGAGGCTTGAGATTAATGGGAACAATGAAAATGAGTTTTGTGCAATGAATAGCACTCCACCCTCATCTCATTCAGGTACCAGTTATGATAACATTGACATGCAGAACAGGAAGAGGTTTGCTGCACAGTTATTAAGGGATTTCGTGGCCTAG 2262 0.4819 MATYFHGSNDNNNTSEIQPSAEGLQTLYLMNPNYVPFSDSAQNPTPSMFFLNPNNNTSTSTSVTHRGHTLNLASLSHAPPQHHQLVGVTIPASNIIGGGANAEEIPSFHGFAMAAAGAPRVHYNLWGSIVDQTSSSVAAAAAVTTVAAASSSNSGHVATVAGAAATDIGFHGPSHQQGLSLSLSSQQPSYRSFSGEMDAVSPASCGGGCGDVRVVGNSNGVSSMHSVVLGSKYLKAAQELLDEVVNVGNKGISILEGASNSNKGKMKGNIVESTSGVGDGSSGGGESSGAANKQGGELSTAQRQELQMKKSKLVNMLDEVEQRYRQYHHQMQVVVSSFEQAAGFGAARCYTALALKTISKQFRCLKDAISSQIRATSKTLGEDDCLGAKLEGSRLRFVDHHLRQQRALQQLGMIQHSNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEVKDQDQNNGSSSQDNTNRSKESNNELWSTSNTAQEQAAIRLDQINVLQSKAESFNNINNHQNTSPTDQISNSNNNSMSTSPMGGGHPGNFLLAAGSSDMQRSPNKPRSSQIRNSQSSILSMDMEMKPNGETHSEANNNTKFGIERNHGGRGGYGAFSMEDIGRFNVTDHHQQQQQLAPRFHGNGVSLTLGLPPSENLPLSGTQHGFLSQNMHLGGRLEINGNNENEFCAMNSTPPSSHSGTSYDNIDMQNRKRFAAQLLRDFVA* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2305 753 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 12 701 - -
Dod03g2305 753 ProSiteProfiles 'Homeobox' domain profile. 417 480 IPR001356 GO:0003677
Dod03g2305 753 MobiDBLite consensus disorder prediction 545 637 - -
Dod03g2305 753 Pfam Associated with HOX 227 370 IPR006563 -
Dod03g2305 753 SMART HOX_1 420 484 IPR001356 GO:0003677
Dod03g2305 753 MobiDBLite consensus disorder prediction 263 302 - -
Dod03g2305 753 SMART prehox3 222 371 IPR006563 -
Dod03g2305 753 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 12 701 - -
Dod03g2305 753 SUPERFAMILY Homeodomain-like 421 486 IPR009057 -
Dod03g2305 753 Coils Coil 303 330 - -
Dod03g2305 753 MobiDBLite consensus disorder prediction 545 572 - -
Dod03g2305 753 MobiDBLite consensus disorder prediction 584 611 - -
Dod03g2305 753 MobiDBLite consensus disorder prediction 489 521 - -
Dod03g2305 753 CDD homeodomain 420 481 IPR001356 GO:0003677
Dod03g2305 753 Gene3D - 415 494 - -
Dod03g2305 753 MobiDBLite consensus disorder prediction 492 521 - -
Dod03g2305 753 Pfam Homeobox KN domain 437 476 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2305 Dod-Chr3 53603958 53611033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2305 1 753 Homeobox Transcription Factor Family AT2G35940 41.964 7.41e-141 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod03g2305 POX 1.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2305 - - gmx:100812360 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1429 10 34566261 34570280 Dod03g2305 03 53603958 53611033 PCT